Prionailurus viverrinus (fishing cat): 125152855
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Entry
125152855 CDS
T09889
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125152855 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125152855 (EXOSC5)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125152855 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125152855
NCBI-ProteinID:
XP_047691345
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All DBs
Position
E2:complement(49220551..49229971)
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AA seq
235 aa
AA seq
DB search
MEGVMQTDAKMRTESGAESSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSEGTLVLDPTAKQEKEARAI
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtgatgcagactgacgccaagatgcgtactgagtctggagcagagtccagt
cctcgaggtccaggctgcagtctccggcactttgcctgtgagcagaacctgttgtcccgg
ccggacggctctgcctctttcctgcaaggagatacatcggtcctggcgggcgtatatgga
ccagccgaggtgaaggtcagcaaagagatcttcaacaaggccaccctggaggtgattctg
aggccgaagattgggctgcctggcgtcgctgagaagagtcgggagcggctgatcaggaac
acttgtgaagcagtggtattgggagcgctgcacccccgtacctccattactgtggtgctg
caggtcgtcagtgatgctggctctctcctggcctgttgcctgaacgctgcctgcatggca
ttggtggatgcaggtgtgcccatgcgggccctcttctgtggggtcacctgtgctctggac
tctgaggggaccctcgtgctggaccccacggccaagcaggaaaaggaggcccgggccatc
ctgacctttgccctcgacagtgtggaacggaagctgctgatgtccaccaccaaggggctc
tactcggatgctgagctccagcagtgcctggccgcggcccaggctgcctcgcaacacgtc
ttccgcttctaccgggaatcgctacagagacggtactccaagagctga
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