Prionailurus viverrinus (fishing cat): 125152959
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Entry
125152959 CDS
T09889
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125152959 (TAF1C)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125152959 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
125152959
NCBI-ProteinID:
XP_047691647
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All DBs
Position
E2:5466510..5475462
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AA seq
888 aa
AA seq
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MDFPGSLPPTLFRTGPLGVSNTPDLSFMCSWRDALTLPEPLAQNSQNGVSCTAAAPLWEP
ETPGPLPLLPPGPDPWDPGVTARDLLFRGGIPFRRKPRAVLDVTEQVGRRTVASAVWPGL
CLVTWPPLLQLSRFLWDHGDIAFAPLGKLMLENFKLEGARSHSKKKTVVSVKSLLQDLGG
HQPWGCPWASLSFRQRRFSILGGPVLGTSVAGLLGELLHEELATRWERLLLDDAFTGGAL
AWVPGRTPRVGQLVYPAGGALDKLHFQEVSVAPGGDPQALGDPGHIQLRGPVRQVVTHTV
QGEALLAVRSDYHCALWKVSKQGRPAPLQVLQIGKGATGISLSPHLPGELAVCSRSGAVC
LWTPQDGLQQIYKDPETLVFRDPSPWRWADFTAHPRVLTVGDRTGVKIIDTQGPPGCGLL
LFRGGAEAACQKGERVLLTRYLGGCGPEPLCPTFHLILTQFSLYLVDERLPLVPLLKWNH
DLPSAPLFAQLLPPPQPGHAQPLLLGGQGGHLRLLQLAGTGASAPRLAGPPQSLPSSSDS
LSAFPLLEPKSQWRLQERLKAPTIGLAAVLMPSASAPVLFLFQLSAAGDVFHQSLRLQAD
PGLASGAPVASWTPQATARCGRWLKALLEVPLPPPVWAAPNFSHRRVLGCVEPRRMEQKV
PEGLRAAMAEGRLLLRRDLGSAPSAEPPPAPEPGPEDELSARLEAAWEGRAAAWWESQQG
GSSGPGKRPQRHKRRTQLSSTFSSLSGRLDLSDATSPPRSPDRTSPEARPQPPVTPPSQE
LTQEPWARGVPSERQQTLRDYMAKLPLRGDPPGGVPSPLSQASGVRATPSGQQPLQDGSA
ERPLRRHMLGGAAVPSSQTSGVRATPSRQQAPVPSGSQPRRRKPRMGF
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccggctcgctcccacccacgttgtttaggaccggcccccttggtgtgagt
aacacccctgacctgtctttcatgtgtagctggagagacgcgctcaccctgcctgagccc
ctggcccagaactcccagaatggggtgtcgtgcacggccgcagccccgctctgggagccg
gagacccccgggccccttcccttgctgcctcctggtcccgatccctgggaccctggggtg
accgcccgggacctgcttttccggggaggtatcccgttccgaagaaagccccgggccgtg
ctggatgtgacggaacaggtgggtaggcgcacggtggccagtgccgtgtggccggggctg
tgcttagtgacctggcctcctctcctgcagctcagccgcttcctgtgggaccacggggac
atagcctttgcgcccctggggaagctgatgctggagaatttcaaactagagggagcacgg
agccattctaagaagaagacagtggtcagtgtgaagagtctgctccaggacctcggtgga
caccagccctgggggtgtccctgggcttccctcagcttccgacagcgccggttctccatc
ctcgggggccccgtcctgggcacgtccgtggccggcctgctgggagagctgctgcatgag
gagctggccacgcggtgggagcggctcctcctggacgacgcgtttaccgggggcgcgttg
gcctgggtgcccggaaggacgccccgggtgggacagttggtctaccctgcgggaggcgcc
ctggacaagctgcatttccaagaggtcagcgtggccccaggtggtgacccccaggccctc
ggcgaccctggccacatccagctccgagggcctgtccggcaggtggtgacccacaccgtg
caaggggaagccctgctggctgtccggtctgactaccactgtgccctgtggaaggtcagt
aagcaggggcgccccgcccccctccaggtgctgcagatcgggaagggggccacagggatc
agcctcagccctcacctgcctggggagctggctgtctgcagccgttcgggagccgtctgt
ctgtggaccccccaggatgggctgcagcaaatctacaaggaccccgagacccttgtgttc
cgggacccctctccctggcgctgggcagacttcacggcccatccccgggtgctgaccgtg
ggtgaccgcactggagtgaagattatcgacactcagggcccacccgggtgtggtctgctg
ctctttcgtgggggggcagaagcagcgtgccagaaaggggagcgcgtcctgctgacccgg
tacctgggggggtgtggccccgagcccctgtgccccacgttccatctcatcctgacccag
ttctcgctctacctggtggatgagcgcctccccttggtgcccctgctgaagtggaatcac
gacctcccctccgcccccctgtttgcccagctgctgcccccgccccagcccgggcacgca
cagccgctgctgctggggggccagggcgggcacctgcggctgctgcagctcgcaggaacg
ggggcctccgcgccccggctggcgggccccccccagtctctcccctccagcagcgactcc
ctctccgcgttccccctgctggagcccaagagtcagtggcggctgcaggagcgtctgaaa
gcgccaaccataggtctggctgccgtgctcatgccctctgcctccgcgccggtcctgttc
ctcttccagctttccgcggctggggatgtcttccaccagagcctccgcctccaggcggac
cccgggctcgcctccggtgcccctgtggcttcctggactccccaggccaccgcccgctgc
ggccggtggctgaaggccctgctggaggtacccctgcctccccccgtgtgggcagcaccc
aacttctcccaccgccgtgtgctaggctgcgtggaaccgcggcggatggaacagaaggtg
ccggagggtctccgtgcagccatggccgaagggcgactcctgctgcggagggacctgggc
tccgcgccctctgcggagccaccccctgcccccgagccaggccccgaggacgagctcagt
gcgcgtttggaggcagcctgggaaggccgggcggccgcctggtgggagagccagcagggc
gggagctcggggcccgggaaacggccccagcggcacaagcgccggactcagctgtccagc
actttctcctcgctcagcggccgcctggacctctcggacgccaccagccccccccgcagc
ccagaccggacgtcccctgaggccaggcctcaaccaccggtgaccccgccctcccaggag
ctgacccaggagccgtgggctcggggtgtcccctcggagaggcagcagacgctccgggac
tacatggccaagctaccgctccgcggggaccccccaggaggcgtcccctcacccctgtcc
caggcctctggtgtccgggccaccccctccgggcagcagcccctccaggatggctcagcg
gagcggccgctccgaaggcacatgctgggaggtgccgccgtgccctcttcccagacctcc
ggcgtccgggccaccccctccaggcagcaggcgcctgtcccctcgggctctcagccgagg
aggaggaagccccgcatgggcttctga
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