Prionailurus viverrinus (fishing cat): 125153032
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Entry
125153032 CDS
T09889
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
125153032 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
125153032
NCBI-ProteinID:
XP_047691839
LinkDB
All DBs
Position
E2:complement(55210461..55254218)
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AA seq
2179 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPPPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFNPSSGG
PLPSSSPASFDGPSPPDTRVGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPGPTPGAPSPSHHGGGGGGIGSSQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP
PPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGGGGGGGGG
GGGAGGGGGSSAPSPAPAMSPVPPSPSPVPTPSSPSGPATLDFTSQFGAALVGAARREGG
WQNEARRRSTLFLSTDAGDEDGGDGGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAG
AGSGVGYGGYGAGGRAYAGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERA
LKESSEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYR
AGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKAWRSGAPE
EPERLPLHVRFLENCQPRAGGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGGEENGLP
LLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLP
PVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPPAPQP
GPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGGAGVASG
PELLDTYVAYLDGQAFGGSGAPGPPYPPQLMTPSKLRGRALGTSGGLRPGPSGGLRDPVT
PTSPTVSVTGAGTDGLLALSGCTGPSSAGMAGGPVAIEPEGPPVPLPSASSLPRKLLPWE
EGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGS
GDSHHGGASYVPERTSSLQRQRLSEDSQPSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPS
AAAAPGATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPI
LPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLL
SLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGV
TRVGHRMNIDRALKFFLER
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggggcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctccgcttcaaccctgatgccaccatctggacagccaag
caacaggtgctctgcgccctgagcgagagcctgcaggatgtgctcaactacggtctgttc
cagccggccacctccggccgcgatgccaactttctggaggaggagcggcttcttcgagag
tacccccagtcttttgagaagggggtgccctacctggagttccgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggaatacgtgcagctcgggacgtccgacaaggtggcaaggctgctggac
aaggggctggaccccaattatcacgactcggattcgggagagacccccctgacgctggca
gcccagaccgaaggctccgtagaggtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgggcccgggatggcatgaccgcgctgcacaaggccgcgtgtgcccgtcactgc
ctggctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggctatggtggggggtgacccccgctgctgcgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcgaggccactctcagcacctggaacacctgctcttctatggggctgagccg
ggagcccagaatgcctcggggaacacggccttgcacatctgcgccctctacaataaggag
acctgtgctaggatcctcctctatcgaggagctaacaaggatgtgaagaataacaatgga
cagacccccttccaggtggctgtgatcgctgggaattttgaactgggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtacgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccggcactgcttcgggccaacagtgat
accagcatggccctgcctgactggatggtgtttgccgccccggggacctcgtcctctggg
gcccccggccctacctcagggccccagggccagtcgcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccagcagggggcacagggggctcagggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcggcggtacccggacgctccttcatg
gccgtgaagtcataccaggcccaagcggagggggagatctccctgagcaagggcgagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcgtt
ggctggttcccctctgactgcctggaagaggtggcaaaccgctcccaggagggaaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tatctggagtccgtggatgagggtggcgtggcatggcgagctggactgcggatgggagac
ttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccgacaggtggtgaac
atgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaggctgtccataagaaagcaccccagcaggctaagcggctcccgccccca
gccatctctcttcgttccaagtccatgacctcagagctggaggagatggagtacgagcag
cagcctccgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctcaac
aaactggatgaaattttggcggcagctcagcagaccatcagcgcaagcgagagtcctgga
cctggtggccttgcgtcgctgggcaaacaccggcccaaaggcttctttgccaccgagtca
agcttcgatccgcaccaccgctcccagccaagttatgaacgtccttcttacctgcctcca
ggacccgggcttatgctccggcaaaaatctatcggggctgcagaagatgacagaccctac
ctagcacccccagccatgaagttcagccgcagcctgtctgtgcctggctcggaggacatc
cctccgccgcccaccacgtccccaccggagcccccctacagcacacctccggtcccctcc
tcctctggccgcctcaccccatcccccagaggagggcccttcaaccccagttcgggtggc
cccctcccgtcctcttcccctgcgtccttcgatgggccctcccctcccgacacgcgcgta
gggggccgcgagaagagcctgtaccacagcgggcccctgccccccgcccaccaccacccg
ccccaccaccaccaccatcacgccccgcccccccagcctcaccaccaccacgcccacccc
cctcatcccccggagatggagacgggcggctctcccgacgaccccccaccccgactggcc
ctggggccgcagcccagcctgcgcggctggcggggtggcgggcccggccccaccccgggg
gccccgtccccgtcgcaccacggcggcgggggcgggggcatcggctcctcccaggccccg
gccctgcgctacttccagctgcccccccgggcggccagcgcggccatgtacgtgccagcc
cgctcgggccgcgggcgcaaggggcccctggtcaagcagaccaaggtcgaaggcgagccc
cagaagggcggcggcctcccgcccgccccctcgcccacgtccccggcgtccccgcagccg
ccgcccgccgcggccgcgccctcagagaagaactccatccccatccccaccatcatcatc
aaggctccgtccaccagtagcagcggccgaagcagccagggcagcagcaccgaggcggag
cccccgacccagcccgaggccgcgggcggcggcggcggcggcggcggcggcgggggcggg
ggcggcggggccggcgggggcgggggctcctcggcgcccagccccgccccggccatgtcg
ccggtgccgccgtcgccctcgccggtgcccacccccagctcgcccagcggcccggccacc
ctcgacttcaccagccagttcggagcggccctggtgggcgcggcgcggagggaaggcggc
tggcagaacgaagcccgccggcggtccacgctcttcctctccaccgacgcgggggacgag
gacggcggcgacggcgggctgggccccggggcgcccccgggcccccggctgcgccactcc
aaatccatcgacgagggcatgttctccgccgagccctacctccggctggagtccgccggc
gcggggagcggcgtcgggtacgggggctacggggccgggggccgagcctacgcgggcagc
gggggcagcagcgccttcaccagcttcctgccgccccgacccctggtccacccgctgacc
ggcaaggccctggacccagcctccccgctcgggctggccctggccgcccgagagcgggcg
ctgaaggagtcctcggagggcggcgggcccccccagccccctccaaggcccccatcgccc
cgctacgaggcgccgccgcccaccccgcaccaccactcgccccacgcccaccacgagccg
gtgctgcgtctctggggggcctcaccgccggatcccgcccgccgggagctggggtaccgg
gcagggctgggcagccaggagaagtcccttccggccagccctccagcggcccgacgctcc
ttgctgcaccgcttgccccccacagctcccggggtcgggcccctcctcctgcagctgggg
cccgagcccccggccccgcaccccggggtgagcaaggcgtggaggtcgggggcccccgag
gagccggaacggctgcccctccacgtgcggttcctcgagaactgccagcccagagccggc
ggcgcgggcggaagggggcccccctcggaggacgggccgggggttccgcctcccagcccg
cgccggtccgtaccgccctcgcccacctccccgcggggcggcgaagagaacgggctcccc
ctgctggtcctgccgccccccgctccctcggtggacgtggaagacggcgaattcctcttt
gtggaaccgctgcccccgcctctggagttctccaacagcttcgagaagccagagtcgccg
ctcacacccgggcctccgcacccgctgccggacccccccaccccaaccaccccgttgccc
cccgtgccgccgcccgccgtggccgccgcgcctcccaccctggactccacggcgtccagc
ctgacttcctatgacagcgaggtggccacactgacccagggggcccccgtggctcccggg
gacccccctccgccaggcccgccggccccggccgccccggctcccccggccccacagcct
ggccccgacccgccgcctggcacggattctggtatcgaggaggtggacagtcggagcagc
agtgaccacccgctggagaccatcagcagcgcgtccacactgagcagcctgtctgccgaa
ggcggtggcagcgccggaggcggcggcggcggtggcggcggggccggtgtggccagtggg
ccggagctcctggacacgtatgtggcctacctggacggccaagccttcggggggagtggt
gctcccgggccaccgtaccccccgcagctcatgactccttccaagctccggggccgggct
ctggggaccagcggaggcctgcggcccggccctagtgggggactccgggaccctgtcact
cccaccagccccacagtctccgtgacgggggctggaacggatgggctgctggccctgagc
ggttgcacaggaccctcatcggcgggtatggccgggggtccggtggctatagagccagaa
ggcccacccgtgcccttgccatcagcctcctctctgcctcggaagctgctgccctgggag
gagggcccgggcccaccgccaccacccctgcccgggcccttggcccagcctcaggcctca
gccttggccacagtaaaagccagcatcatcagtgaactcagctccaagcttcagcaattt
gggggctcctcggcagctggtggcgctctgccctgggcccggggaggcagcgggggaagc
ggggacagccaccacgggggagccagctacgtccccgagaggacctcttccctgcagcgg
cagagactctccgaagactcccagccctcgctcctctccaaacccgtcagcagcctgttt
cagaactggcccaaaccacctctgccgccactccccacgggaactggggtctccccttcc
gccgctgcagctccgggggccacgtcaccctcagcctcctcctccacgtccacccgccac
ctccagggcgtggagttcgagatgcggccgcctctgctccgccgggcccccagcccctca
ctgctgcccgcctcggagcacaaggtcagccctgcgcccaggccctcgtccctgcccatc
ctgccttctggacccttgtacccgggcctctttgacatccgtggctccccaaccggaggg
gcaggaggctccgctgaccctttcgcccccgtctttgtgccgccacaccccgggatgtcc
ggggggcttggtggagccttgtcaggggcctcccgctccctctcaccaacccgcctgctt
tcgctgcccccggacaagcccttcggcgctaaacctctggggttctggaccaagttcgac
gtggctgattggctcgagtggctgggcttggctgagcaccgagcacagttcctggaccac
gagatcgatggctcccatctgcccgccttgaccaaggaggattacgtcgatctgggcgtg
accagggtgggccaccgcatgaacatcgaccgggctctcaaatttttcctggagaggtga
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