Prionailurus viverrinus (fishing cat): 125153086
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Entry
125153086 CDS
T09889
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125153086 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125153086 (SF3B3)
03041 Spliceosome [BR:
pviv03041
]
125153086 (SF3B3)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125153086 (SF3B3)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125153086 (SF3B3)
Spliceosome [BR:
pviv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125153086 (SF3B3)
Complex B
125153086 (SF3B3)
Complex C
U2 SnRNP specific factors
125153086 (SF3B3)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125153086 (SF3B3)
TFTC complex
125153086 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
125153086
NCBI-ProteinID:
XP_047691942
LinkDB
All DBs
Position
E2:14073001..14121668
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccgtgggaagatactggagctg
cttcgtcccgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgacgggtggcaccaaggactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaggggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatctcccttggaagcc
cacaaagcgaacactttagtatatcatgtggttggagtagatgtaggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatcccacaggggaagca
gcagctaatacccagcagacgcttactttctatgagttagaccttggtttaaatcatgtg
gtccggaaatacagtgaacctttggaggaacatggcaactttcttattacagttcccgga
gggtcagatggtccaagcggagtgctgatctgctctgaaaactatatcacctataagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcaaggagatatcttcaagatcactttggagacagatgaagat
atggttactgagattcggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaatcattacttatatcaa
attgcacatcttggagatgatgatgaagagcctgagttttcatctgccatgcctctggaa
gaaggagacacgttcttcttccagccaagaccacttaaaaaccttgtgctggtcgatgag
ttggacagcctctctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctgtatgtggcctgcggtaggggaccccgatcatctctgagagtcctgcggcac
ggacttgaggtgtcagaaatggctgtctctgagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctatatcattgtgtctttcgtgaat
gccacacttgtactatccatcggagagactgtggaagaagtgactgactctgggttcctg
ggcacaaccccaaccttatcctgctccttgttaggagatgatgccttggtacaggtgtat
cctgatggcattcggcatataagagcagacaagcgagtcaatgagtggaagacccctggg
aagaaaacgattgtgaaatgtgctgtgaaccagcgacaagtggtgattgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaatgagtacacagagcgg
aaggagatgtcagccgatgtggtgtgcatgagtctggccaatgtgcctcctggagagcag
cggtctcgcttccttgctgtggggctggtggacaatactgtcagaatcatctccctggac
ccctcagactgtttgcagcctctgagcatgcaagctctcccagcccagcctgaatccttg
tgtattgtggaaatgggtgggactgagaagcaagatgagctgggtgagaggggctctatt
ggcttcctatacttgaatattgggttacagaatggtgtgctgctgagaactgtcctggac
cccgtcactggggatctgtctgacacccgcactaggtacctggggtctcgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaagaggcagtgttggccatgtctagccgctcgtgg
ttgagctattcttaccagtctcgtttccatctcacccccttgtcttatgagaccctggaa
tttgcgtctggcttcgcctctgaacagtgtcctgagggcattgttgccatctccaccaat
accctgaggattttagcattggagaagctaggtgctgtcttcaatcaggtagcctttcca
ttgcagtatacacccaggaaatttgtcattcacccagagagtaacaaccttatcatcatt
gagacagaccacaatgcctacacagaagctacaaaagctcagagaaagcaacagatggca
gaggaaatggtagaagcagcaggggaggacgagcgggagcttgctgcagagatggcagca
gctttcctgaatgaaaacctccctgaatccatttttggagctcctaaggctggcaatggg
cagtgggcctctgtgatccgagtcatgaatcctattcaagggaacacactagaccttgtc
cagctagaacagaatgaggctgcttttagtgtggctgtttgtaggttctccaatactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgatactcaatccccggtctgta
gcagggggctttgtctatacctacaagcttgtgaacaatggggaaaaattggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacttggggaagaagaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgacgtccaggaaagtttcatctgggttcgatacaagcgtaatgagaaccag
ctcatcatttttgctgatgatacttacccacgatgggtcactacggctagccttctggac
tatgacactgtggctggggcagataagtttggcaacatttgtgtggtaaggctcccacct
aacaccaatgatgaagtggatgaggatcccacaggaaacaaagccttgtgggaccggggc
ttgctcaacggggcctctcagaaggcagaggtgatcatgaactaccatgtaggcgagaca
gtgctgtcattacagaagaccacactgatccccggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtccccttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattacttccctgttaagaatgtgatagacggagacctctgtgaa
cagttcaactccatggagcccaacaaacagaagaatgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggacccgttatgccttctga
DBGET
integrated database retrieval system