Prionailurus viverrinus (fishing cat): 125153817
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Entry
125153817 CDS
T09889
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125153817 (SAMD4B)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125153817 (SAMD4B)
BRITE hierarchy
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
125153817
NCBI-ProteinID:
XP_047693303
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All DBs
Position
E2:48010765..48046081
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AA seq
695 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCNDIHLLES
EANSAAIVSQWQQESKEKVVSLLLSHLPLLQPGNTEAKSEYMRLLQKVLAYSIESNAFIE
ESRQLLSYALIHPATTLEDRNALALWLSHLEERLASGFRTRPEPTYHSRQGSDEWGGPAE
LGPGEAGPGWQDKPPRENGHVPFHPSSSVPPAINSIGSNANTGLPCQIHPSPLKRSMSLI
PTSPQAPGEWPSPEELGARAAFTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSG
MKDVPSWLKSLRLHKYAALFSQMSYEEMMTLTEQHLESQNVTKGARHKIALSIQKLRERQ
SVLKSLEKDVLEGGNLRNALQELQQIIITPIKAYSVLQATVAAAAAATPTAKDGSRGEPP
LPGAEPPLAHPGTDKGTEAKDPPAAESYPPPPAPAPTDGSEPAPAPVADGDIPSQFTRVM
GKVCTQLLVSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRTFPRKAA
LEMQSYRQQKGWAFGSNSLPIAGSVGMGVARRTQRQFPMPPRALPPGRMGLLSPSGIGGI
SPRHALTSPSLGGQGRQNLWFANPGGSNSMPSQSRSSVQRTHSLPVHSSPQAILMFPPDC
PVPGPDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgcgaccaggtgggcatcctcgctggctggttcaagggctggaatgagtgt
gagcagacggtggccctgctgtcacttctgaagcgggtcactcgcacccaggcccggttc
ctgcagctctgcctggagcactcactggcggactgcaatgacatccacctgctagagtcg
gaggccaacagtgctgccatcgtcagccagtggcagcaggagtccaaagagaaggtggta
tccctcctgctgtcccacctgcccctgcttcagccaggcaacacggaggccaagtcggag
tacatgagactgctgcagaaagtgctggcctactcgatcgagagcaatgccttcatcgag
gagagccgccagctgctctcttacgccctcatccacccggccaccacactggaggaccgc
aatgcactggccctctggctgagccacctggaagagcggctggccagcggcttccgcacc
cggcctgagcctacctaccactcacgccaaggctcagatgaatgggggggccctgcagag
ctgggccctggggaggcagggccaggctggcaggacaaaccaccccgggaaaatggacac
gtgcccttccacccatccagctcagtgccgccagccatcaacagtattgggagcaatgca
aacacaggtctcccctgccaaattcaccccagcccgctgaagcgctccatgtctctcatc
cccacgagcccccaggcccctggtgagtggccgagtccggaggagctcggggcccgggct
gctttcaccacgcccgaccacgcacccctctcaccccagagcagcgtggcctcctctggc
agtgagcagacggaggagcagggctccagccggaacaccttccaggaggacggcagtggc
atgaaagatgtaccctcatggctcaagagcctccgcttgcacaagtacgcagccctcttc
tcacagatgagctacgaggagatgatgacactgactgagcagcacctggagtctcagaat
gtcaccaaaggtgcccgccacaagatagccctcagcatccagaagctgcgtgagaggcag
agcgtcctcaagtccctggagaaggatgtgctggaaggagggaatctgcgaaacgctctg
caggagctgcagcagataattatcacccccatcaaggcctacagcgtcctccaagccacc
gtggctgctgccgctgctgccacccctactgccaaggatgggagccggggggagccacca
ctgccaggtgctgagcctcccctggctcaccccggcacagacaagggcactgaggccaag
gaccctccagctgcagagagctacccccctccaccagctccggctcccactgatggcagt
gagccagccccggctcccgtcgccgacggagacatccccagccagtttacacgggtgatg
ggcaaagtgtgcacccagctgctggtgtcccgaccagacgaggagaacatcaccagttac
ctccagctcattgaaaagtgcctgactcatgaggcgttcacggagacgcagaagaaacgg
ctgctgtcctggaaacagcaagtgctgaagctcctgcggaccttcccacgcaaagccgca
ctagagatgcagagctaccggcagcagaaaggctgggcgttcggctccaactcgcttccc
atagctggctctgtggggatgggggtagcccggcggacccagcggcagttccccatgcct
ccccgggccctcccgcccggcaggatgggccttctgagcccttcgggcattgggggcatc
tccccgcgacatgccctcactagccccagtcttgggggccagggccgacagaacctgtgg
tttgccaaccccggaggcagcaacagcatgcccagccagagccgcagctctgtgcagcgc
acccactccctcccggtccattcgtcgccccaggccattctcatgttccctccagactgc
ccggtccctgggcctgacctggagatcaatcccactctggagtctctatgtctgagcatg
acagaacacgccttgggtgatgggacagacaaaacctccaccatctga
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