Prionailurus viverrinus (fishing cat): 125153973
Help
Entry
125153973 CDS
T09889
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04612
Antigen processing and presentation
pviv05145
Toxoplasmosis
pviv05152
Tuberculosis
pviv05164
Influenza A
pviv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125153973 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125153973 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
125153973 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
125153973 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
125153973 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pviv01001
]
125153973 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pviv04054
]
125153973 (CIITA)
Enzymes [BR:
pviv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125153973 (CIITA)
Protein kinases [BR:
pviv01001
]
Serine/threonine kinases: Other
TAF1 family
125153973 (CIITA)
Pattern recognition receptors [BR:
pviv04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125153973 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
125153973
NCBI-ProteinID:
XP_047693486
LinkDB
All DBs
Position
E3:complement(32965344..33012671)
Genome browser
AA seq
1204 aa
AA seq
DB search
MNHFQTILPRVRMLLAGHLPSQARALLDSMLERELLSREYHCALLREPDGEALARKISLT
LLEKGDPGLALLRWAWGTWQAPLAERDPDDKDRAGSGQCAAMELGPLEGGYLELLNSNAD
PLQLYHLYDQMDPAREEIELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLEGLSKGIFIEHIGLEEMIGESVETLEEKKSQKRSFPEELPMDSKHRKLAEPLA
VPMVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQRWLEETILMPVPPSSSLLSCLSLS
AGHIQIVPTLPQGLWQISGAGTGVSGMVIYQGEVPQASQVLPSSSPAIHSLPKSPERPGS
TSPFAPSAADLPGMPEPALTSRADVTEEQMSPTRSPAAHEVSGQLPKWPERVEKFCSTLR
DMYQAEPAGPEGILVEVELVRARLERSSSKSQERELATPDWAERQPARGGLAEVLLAGGD
RRRPRETQVIAVLGKAGQGKSRWAREASRAWARGQLPQYDFVFYLPCHCLDRGGDTYRLQ
DLLFSLGPRPLPVDDEVFSYVWRRPDRVLLILDASEGLEGQDGLLHSACGPVCTEPHSVR
GLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADALFEVAGFSAEQAKTYLTRYLERAG
ATERQERALELLQGQPFLLSHCHSPTLCRAVCQLSEALLELGGETELPSTLTGLYVGLLG
PAARDSPPGALAGLARLAWELGRRRRGTLLESQFPSAEARAWAVAKGLVQPAPGAAAVGL
AFSSFLLQCFLGAVWLALSSDIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLVFQPH
ADCLGALAGPAAATLKDRKQKVLTRYLKRLQPGTLRAGQLLELLHCTRETLDAGLWQHVV
QGLPARLSFVGTRLTPPHTYVLGSALEAAGRDFSLDLCSTGIDPPGLGSLVGLSCVTHFR
AALSDMVGLWESLQQRGEAKLLRAVEEKFTIEPFKAKSVKDVEDLGNLVQIQRTRSSSED
TAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVEQ
LSATFPRLKALETLNLSQNNITDVGACKLAEALPSLAASLLRLSLYNNCICDMGAESLAH
VLPDMGSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDSR
ISLK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctggccggccatctgcca
agccaggcccgggccctcctggacagcatgttggagagggagctcctctccagggagtac
cactgcgctctgctccgcgagcctgacggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccaggcttggccctcttgaggtgggcatggggtacgtggcag
gccccgctggccgagagggaccccgacgacaaggaccgtgccggcagtgggcagtgtgcc
gccatggagttggggcctctagaaggcggctacctggagcttctcaacagcaatgctgac
cccctgcagctctaccacctctatgaccagatggacccggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgagcagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgttccaggactcacaactggagggtctgagcaaaggcattttcatcgagcatatagga
ttggaagaaatgatcggcgagagtgtggagacgctggaggaaaagaaaagtcagaaaaga
tccttcccagaggagctgcccatggactcgaagcacaggaagctggctgagcccctcgct
gtgcccatggtgactggcactttcctggtggggtccgtgagtgactcctcagctctgccc
tgcctgtcaccccctgctgtgttcaacaaggagccagcatccagccagaggtggctggag
gagaccatcctgatgcctgtgcccccttccagttccttgctgagctgcctgagcctttct
gctggacacatccagatcgtccccactctgccccaggggctctggcaaatctcaggggct
ggcacaggggtatctggtatggtcatctatcaaggtgaggtgccccaggccagccaggtg
cttccttccagcagccccgccatacatagcctccccaaatccccagaacggcccggctcc
accagcccctttgccccgtctgccgctgacctccccggaatgccggaaccagctctgacc
tcccgtgcagatgtgacagaggagcagatgtcccctacccgatccccggcagctcacgag
gtctccggccagctcccaaaatggcctgagcgggtggagaagttctgcagcacccttcgg
gacatgtaccaggctgagcccgcaggcccggaaggcatcctggtggaggtggagctggtg
agggcgcggctggaaaggagcagcagcaaaagccaggagagggagctggccaccccggac
tgggcagagcggcagccggcccgcgggggcctggccgaggtgctgctggcggggggtgac
cgccggcggccgcgggagacgcaggtgatcgctgtgctgggtaaagcggggcaggggaag
agtcgctgggcccgggaagcgagccgggcctgggcccgcggccagctgccccagtacgac
ttcgtcttctacctcccctgccactgtttggaccgtgggggggacacctaccgcctgcag
gatctgctgttctccctgggcccccggccgctgccggtggacgatgaggtcttcagctac
gtctggaggaggcccgaccgggttctgctcatcctggatgcctccgagggcctcgaaggc
caagacggcctcctgcacagcgcgtgtggacccgtgtgcacagagccccactccgtccgg
ggactgctggcgggcctcttccagcgtaagctgctgcggggctgcaccctgctgctcacg
gcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttcgaggtg
gccggcttctcagccgagcaggccaagacctacctgacacgctacttggagcgcgcaggg
gcgaccgagcgccaagagagagccctggaactcctccagggtcagcctttcctcctcagc
cactgccacagccccactttgtgccgggccgtgtgccagctgtccgaggccctcctggag
ctggggggcgagacggagctgccctccacgctcacgggactctacgtgggcctgctcggc
cctgccgcccgcgacagccccccgggggccctggcgggactggccaggctggcctgggag
ctgggccgcagacgccggggcaccttgctggagagccagttcccgtcggcggaggcgagg
gcctgggccgtggccaagggcttggtgcagcccgccccaggggccgcggcggtggggctg
gccttctccagcttccttctgcagtgcttcctgggggccgtgtggctggccctgagcagc
gacatcaaggacaaggagctgccgcagtatttggcgttgaccccgaggaagaagaggccc
tacgacaactggctggagggcgtgccgcggttcctggcggggctggttttccagccgcac
gccgactgcctcggggccctggcggggcctgccgcggccaccctgaaggacaggaagcag
aaagtgctcaccaggtacctgaagcggctgcagccggggacgctgcgggccggacagctg
ctggagctgctgcactgcacccgtgagactttggacgctgggctctggcagcacgtggtg
caggggctccccgcccgcctctccttcgtgggcacccggctcacgcctccccacacctat
gtcctgggcagcgccttggaggcggcgggccgagacttctccctggacctctgcagcact
ggcattgacccccctggactggggagcctcgtgggactcagctgcgtcacccatttcagg
gctgcgctgagtgacatggtggggctgtgggagtctctacagcagcgtggggaggccaag
ctgctccgggcggtggaggagaagttcaccatcgagcctttcaaggccaagtccgtgaag
gatgtggaagatctgggcaacctcgtgcagatccagaggacaagaagttcttcagaagat
acggctggagaactccctgcggtccgggatctaaagaagctagagttcgcgctgggcccc
gtctcaggcccccaggcttttcccaagctggtgaggatcctcgaggccttttcctccctt
cagcatctggacctggactctctgagcgagaacaagattggcgacgagggtgtcgagcag
ctgtcggccaccttcccgcggctcaaggccctggagaccctcaacttgtcccagaacaac
atcactgacgtgggcgcctgcaagctcgccgaggccctgccctcgctggctgcgtccctc
ctcaggctcagcttatataataactgcatctgtgacatgggagccgagagcctggcacac
gtgcttccagacatggggtccctccgggtgctcgatgtccagtataacaagttcacagcc
gccggggcccagcagctggccgccagcctgagaaagtgccctcacgtggagacgctggcg
atgtggacgcccaccatcccgtttggcgtccacgagcacctacagcagctggattcgcgg
atcagcctgaagtga
DBGET
integrated database retrieval system
