Prionailurus viverrinus (fishing cat): 125153977
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Entry
125153977 CDS
T09889
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pviv03037
]
125153977 (IFT140)
Cilium and associated proteins [BR:
pviv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
125153977 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_CAF1B_HIR1
TPR_IFT80_172
TPR_GEMI5
Beta-prop_WDR75_1st
TPR_COPA_B
tRNA_int_end_N2
RNase_HII
WD40_MABP1-WDR62_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
125153977
NCBI-ProteinID:
XP_047693500
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Position
E3:40634234..40710935
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AA seq
1464 aa
AA seq
DB search
MALYFDHRVEAPDSVGSPSHIHWHPVHPFLAVASVSPTSGGSVDVYLEQGEHAPDTHIER
SFRVTSLCWHPTRMILAVGWETGEVTVFNKQDKEQHAVPPTHTSDITVLKWSPNGNCLVS
GDRLGVLLLWRLDQRGRAQGPPLLKHDYGKHLTHCIFRLPPPGEDLIQLAKAAVSGDERA
LDMFNWRKSGFGSLLKMGSQEGLSFFVSLMDGTVHYVDEKGKTTEAASTDSSVQALFYLE
RREALVVVTRSLLLSLFVVRPEGEAEEVMKVKLSGKTGHRADIALIEDSVLVTAVGEPIL
RFWDLEGGENYVLSPEEKFGFEKGENINCVSYCKVKGLLAAGTDKGRVAMWRKLPGPQSG
RAAEGKDGWAVQTPTVLEGNITHIKWGSRKSLLAVNSISSVVILSEQAMCSHFHQQVAVV
QTSPSLLSVSFLSTGVTHSLRTDMHVRGVFATKDAVAVWNGKQVAIFEPSGATLRNAGTF
LCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLLFPEAEGNPCFLDICGDFLVVGTDL
AHFKSFDLSRREAKEHCGDRKLADLIPGAVGMASLRCNASGGKISILLSKADGSPDSKIC
FYDVEMDTVTLLDLKTGQIDRRETLSFNGQETKKSPAFADKRLRDLVPVSHFWDQSEPRL
FVCEAVREAPGAPLQPGDRKPPAEDGPDPTADVLVLSFFVTEEHGFLLQDSFSRPPAYQT
LLGIQVPHYYFTRKPGEADGEDQGDPGRHRVPHLVGRRPLRDFVGLEGCDKPTQDAMLDF
SFFVTIGDMDEALKCIKLIKSEAVWENMARVCVKTQRLDVAKVCLGNMGHARGARALREA
EQEPELEARVAVLAIQLGMLEDAEQLYRKCGRYDLLNKLYQASDQWQKAVEAAELRDRIH
LRTTYYNYARHLEASADRSLALSHYEKSDTHRFEVPRMLSEDPQSLELYVNKMKDKTLWR
WWAQYLESQAEMDAALHYYELAQDYFSLVRIHCFQGNIQKAAEIANESGNWAASYHLARQ
YESQEEVRQAVHFYARAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMTEAALYYEDKGE
HVDRAVMLYHKAGHFSKALELAFATQQFVALQLIAEDLDERSDPALLARCSDFFLEHNQY
EKAVELLLAAKKHHEALQLCLEQNMTITEEMAEKMTVPKDSKDLSEESRRQLLEQIANCC
MRQGSYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDW
RKEPEIMKTIISFYTKGRALDLLASFYEACAQVEIDEYQNYDKAHGALTEAYKCLAKAKA
KSPLDQETKLAQLQNKMALVKRLIQARRTYAEDPKEAVKQCELLLEEPELDSSVRVGDVY
SFLVQHYLQTEEFQAAYRYLEEMRKKVPSANMSYYVSQQTVDAVHRGLGLPVMRAMSGRV
HHNSVDDRREADEEVQEEEEDSEP
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtattttgaccaccgagtggaagccccggactccgttgggtctccttcccac
atccactggcaccctgtgcatccgttcctggcagttgcctccgtcagcccgacctcagga
ggcagcgtggatgtatacctggaacaaggtgagcatgcgcccgatacgcatatcgagagg
tcgttccgggtcacttccttgtgctggcatccgacgcgaatgatcctggctgttggctgg
gagaccggagaagtgacagtgtttaataagcaggacaaggagcagcatgcggtccccccg
acccacaccagcgacatcaccgtcctcaagtggagccccaacgggaactgcctcgtgtcg
ggggacaggcttggcgtcctgctcttgtggaggttggaccaaaggggtcgggcacaaggg
cctcctctgctgaagcacgactacggaaaacacctaacccactgcatcttccggctcccc
cctccgggcgaggacctcattcagctggcgaaggcggctgtgagtggcgacgagcgagcc
ctggacatgtttaactggaggaaaagcggctttgggagtctcctgaaaatgggctctcaa
gagggactgtcgttctttgtcagcctgatggatgggacggtgcactatgtggacgagaaa
ggcaagaccaccgaggcagcgtccacggacagctcggtgcaggcgctcttctacctggag
aggagggaggccctggtggtggtcacgcggagcctgctgctgtccctgttcgtggtgagg
cccgagggcgaagcggaggaagtgatgaaggtcaagttgagtgggaagacgggtcaccgg
gcagacatcgcgttgatcgaggacagtgtgctcgtgaccgccgtaggggagcccatcctc
agattctgggatttggaaggaggagagaattacgtgctgagtccagaagagaagtttggt
ttcgagaagggagagaatataaactgtgtttcttactgtaaagtcaaaggtctcctggca
gcgggcaccgataaggggcgagttgccatgtggagaaaactgccgggcccgcagagcggc
cgagcggccgagggcaaggacgggtgggccgttcagacccccactgtgctcgaaggcaac
atcacacacatcaagtggggctcgcggaagagcctgctggcggtcaacagcatcagctcc
gtggtgatcctcagcgagcaggccatgtgctcacacttccaccagcaagtggccgtggtg
cagacctccccaagcctgctcagcgtgtccttcctgtccacgggcgtgacgcacagcctg
cgcacagacatgcacgtccgcggggtgttcgccaccaaggatgctgttgctgtctggaac
gggaaacaggtggcgatcttcgagccttctggagccacgttacggaatgcaggaaccttc
ctgtgtgaatctccagtgttagccatgcacgaggaaaacgtttacaccgtggagccaaac
cgagttcaagttcgaacctggcagggcactgtgaaacagctcctactgttcccagaggcg
gaggggaacccatgcttccttgacatctgtggagatttcctggttgtggggacagacttg
gctcactttaaaagctttgatctttcccgaagagaggccaaagagcactgtggtgaccgg
aagctggccgatctgatcccgggcgcagtgggcatggcctcactcaggtgtaacgccagc
ggcggcaagatcagcatcctcctcagcaaggctgacggcagccccgattccaaaatctgc
ttctacgacgtggaaatggacactgtgactctcctggacctcaagacggggcagattgat
cggagggagacgctgtccttcaacgggcaagagaccaagaagagccccgcctttgcggac
aaaagattgagggatctcgttcctgtgagccacttctgggaccagagcgagcccaggctg
ttcgtgtgcgaggccgtgcgggaggcgccgggggccccgctgcagcccggggacaggaag
ccccccgccgaggacggcccggaccccacggctgacgtgctggtcctgtccttcttcgtc
accgaagagcatggcttcttgctccaggacagcttctcccggcctcccgcctaccagacc
cttctgggaattcaagtgcctcactattacttcacgaggaagccaggagaagcagacggg
gaagaccagggggacccggggcgccaccgcgtcccccacctggtgggcaggagacccctg
cgagacttcgtcggactggagggctgtgataagcccactcaggatgccatgctcgacttc
agcttctttgtcaccatcggagacatggatgaagctttgaaatgtatcaagctcatcaaa
agcgaggcagtctgggagaacatggcccgtgtgtgcgtgaagacccagcggctggacgtc
gccaaggtgtgcctggggaacatgggccacgctcgcggagcccgagcgctgcgcgaggcc
gagcaggagccagagctggaggccagggtggccgtgctggccatacagctgggcatgctg
gaggacgccgagcagctgtaccggaagtgcggccgctacgacctcctcaacaagctgtac
caggcgtccgaccagtggcagaaggccgtggaggcagcggaactgcgggaccgcatccac
ctgcgcaccacctactacaactacgccaggcacctggaggccagcgccgaccgcagcctg
gccctcagccactacgagaagtcggacacccaccgcttcgaggtgcccaggatgctctcg
gaggacccacagtccctggagctctacgtcaataagatgaaggacaagaccctgtggcgg
tggtgggcccagtacctggagagccaggcagagatggatgccgcactgcactactacgag
ctggcacaggactacttctccctggtccgcatccactgcttccagggcaacatccagaag
gctgctgagatcgcaaatgagagcggaaactgggccgcgtcctatcatctggcccgccag
tacgagagtcaggaggaggtgaggcaggcagtgcacttctacgcgcgcgcacaggccttc
aacaacgccatccgcctgtgcaaggagaacggcctggacgaccagctcatgaacctggcc
ctgctgagctcccccgaggacatgacggaggctgcgctctactacgaggacaagggcgag
cacgtggacagggcggtgatgctgtaccacaaggccggccacttctccaaggctctggag
ctggccttcgccacccagcagtttgtggccctgcagctcatagcggaggacctggacgag
aggtcggaccctgccctcctggcccgctgctcggacttcttccttgagcacaatcagtac
gagaaggcggtggagctgctcctggccgcaaagaagcaccacgaagccctgcagctctgc
ctggagcagaacatgaccatcactgaggagatggctgagaagatgaccgtgcccaaggac
tccaaggacctgtctgaagagtctcggcgccagctgctggagcagatcgccaactgctgc
atgcgccagggcagctaccacctggccaccaagaagtacacgcaggcggggaacaagctc
aaggccatgagagcgctgctgaagtcgggggacacggagaagatcgtgttctttgcgggc
gtctcgaggcaaaaggagatctacatcatggctgccaactacctgcagtccctggactgg
cggaaggagccggagatcatgaagaccatcatcagcttctacaccaaggggcgggccctg
gacctcctggccagcttctacgaggcctgcgcccaggtggagatcgatgaataccaaaac
tacgacaaagcccacggggcgctgaccgaggcctacaagtgcctggccaaggccaaggcc
aagagccccctggaccaggagaccaagctggctcagctgcagaacaagatggcactggtg
aagcggctcatccaggcccgaaggacatatgccgaggaccctaaggaggcggtcaagcag
tgtgagctgctcctggaggagcccgagctggacagcagcgtccgcgtcggggacgtctac
agcttcctggtgcagcactacctgcagacggaggagttccaggcggcatacaggtatctg
gaggagatgcggaagaaagtgccctccgccaacatgtcctactacgtgagccagcagacc
gtggacgccgtgcaccggggcctgggcctccctgtgatgcgcgccatgtccgggcgggtc
caccacaacagcgttgacgaccggagagaggcagatgaggaggtgcaggaggaggaagag
gacagcgagccctga
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integrated database retrieval system
