Prionailurus viverrinus (fishing cat): 125154104
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Entry
125154104 CDS
T09889
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125154104 (RBBP6)
Enzymes [BR:
pviv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125154104 (RBBP6)
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
U-box type E3
125154104 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125154104
NCBI-ProteinID:
XP_047693795
LinkDB
All DBs
Position
E3:complement(22499400..22531987)
Genome browser
AA seq
1792 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPQPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSTHPAPSISSLTSNQSSLAPPVPGNSSSTPAPVPDITATVSISVH
SEKPDGPFRDSDNKILPAAALASEHSKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSER
SQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYAGGQSHRSRNLGGNYPEK
LSTRDSHNQKDNTKSKEKESENNPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSR
EPTSSEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSTVSKKENVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNAKSSSSSQKD
EKTIGTPRKAHSKSAKEHQEIKPVKEEKVKKDYPKDVKSEKLTNKEEKAKKPSEKSKPPD
SKGEKRKRKTEEKSVEKDFESSSMKVSKLEMTEIVKPSPKRKMEPDIEKMDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENVSNTKEPSEKLESASSKVKQEKVKGKVRRKVAGAEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKATQPMSSVGKPASVIKNVSTKPLNTVKYTEKESESSEKIQKLTKEV
GHEIIQHEIKSSKNSASSEKGKAKDRDHSVLEKENPEKRKNSTQPEKESNLDRLSEPGNF
KSLSQSSKETRTSEKHDSVRGSSTKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKDS
PSRSKDSASGQKTKPREERDLPKKGTGDSKKSNSSPSRDKKPHDHKATYDTKRSTEETKS
VDKNPCKDREKHTLEARNNKESGGNKLLYVLNPPDPQIEKEQVTGQTDKSAVKPKPQLSH
SSRLSSDLTRETDEAAFEPDYNESDSESNISVKEEETSGKIAKELKDKVVEKAKDSLDTA
AASQVGTARSQSPSSPSVSPSRSHSPSGSRTRSHSSSASSAESQDSKKKKKKKEKKKHKK
HKKHKKHKKHAGTEGELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKAKSVPV
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgatttaaagaagcagattatggggagagagaagttgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggcccaccacctccatcttatacc
tgttttcgttgtggtaaacctggccattacattaagaattgcccaacaaacggggataaa
aactttgaatctggtccgaggattaaaaagagcactggtattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaagtatgcgata
ccgactatagacgcagaagcatatgcaattgggaagaaagaaaaaccacctttcttacca
gaggaaccatcttcttcttcagaagaagatgatcctatcccagatgaattattgtgtctc
atctgcaaagatattatgactgatgccgttgtcattccctgctgtggaaacagttattgc
gatgaatgtataagaacagcactcttggaatcagatgatcatacatgtccaacatgccat
cagaatgatgtctctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaacgaaaccggttatacaaaaaggctacgaaaacagttacccccaccacag
cccccaataccacctccgagaccactcattcagcggaacctacaacctctgatgagatct
ccaatatcaagacaacaggatcccctgatgattccagtgacctcttcaactcacccagct
ccttctatatcttcattaacttctaatcagtcttccttggcccctcctgtgcctggaaat
tcatcttctaccccggctcctgtacctgatataactgccacagtgtccatctcagtccac
tctgaaaaaccagatggacctttccgggattctgataataaaatattaccagctgcagcc
cttgcatcagaacattcaaagggaacctcttcaattgcaattactgctcttatggaagag
aagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcactactgcat
ggacagttgatccccacaactggtccagtaagaataaatactgctcgtccgggtggtggt
cgaccaggttgggaacattccaataagcttggatatctggtttctccgccacagcaaatt
agaaggggggagaggagctgctacagaagtataaaccgcggacgacaccacagcgaaaga
tcacagagaactcaaggcccatcactaccagcaactccagtttttgtgcctgtcccaccc
cctcctttgtatccacctcctccccatacacttcctctccctccaggtgttcctccacca
caattttctcctcagtttcctcctggccagccaccacctgctggatatagtgtccctcct
ccagggtttccgccagctccggccaatttatcgacaccttgggtatcatcaggagtgcag
acagctcattcaaataccatcccaacaacgcaagccccaccgttgtccagggaagaattc
tatagagagcaacgacggctgaaggaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtctaaatctccttatagtggttcatcatattcaagaagttcgtatact
tattctaagtcaagatctggttcaacacgttcacgttcttactctcgatcatttagccgc
tcacattctcgttcctattcccgatcacctccatacccccgaagaggcagaggcaagagc
cgaaattaccgttcacggtctagatctcatggatatcatcgatctaggtcaaggtcaccc
ccctatagacgataccattcacggtcaagatctcctcaagcatttaggggacagtctccc
aataaacgtaatgtgcctcaaggggaaacagaacgtgaatattttaatagatacagagaa
gttccgccaccttacgacatgaaagcttattacgggaggagtgttgactttagagaccca
tttgaaaaagagcgttaccgagaatgggaaagaaaatatagagagtggtatgaaaagtat
tataaaggttatgctgccggagcacagcctagaccatcagcaaatagagagaacttttct
cctgagagatttttgcctcttaatatcagaaattctcccttcacgagaggccgcagagaa
gattatgctggtggacaaagtcatagaagtcgaaacttaggtggcaactatccagaaaag
ctttcaacaagagatagtcacaatcagaaggacaacacaaagtcaaaagagaaggagagc
gaaaataatcccggagatggtaaaggaaacaaacataagaaacataggaaaagaagaaag
ggggaagagagtgaaggctttctaaaccccgagttattagaaacttctaggaaatcaaga
gaacctacaagcagtgaagaaaataaaacagactcattgtttgttctcccaagtagagat
gatgctacacctgttagagatgaaccaatggatgcagaatccatcactttcaagtcggtg
tctgaaaaagacaagagggagaaagataaaccaaaagcaaaaggtgacaagaccaaacgg
aaaaatgatgggtctactgtgtccaaaaaagaaaatgttgcaaaacctgctaagggaccc
caagaaaaactagacggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaa
gccaaagaggagactccaaagactgataatgctaaatcatcatcttcctcccaaaaagat
gaaaagaccattggtacccccagaaaagctcactctaaatcagcaaaagaacaccaagag
ataaaaccagtcaaagaggaaaaagtgaagaaggattaccccaaagacgtcaagtcagaa
aagctaactaataaggaagaaaaggccaagaagcctagtgagaaaagtaagccacctgat
agcaagggagaaaaaagaaaaagaaaaactgaagagaaaagtgtagagaaagattttgag
tcctcttcaatgaaagtctctaaactggaaatgactgaaatagtgaaaccatcaccaaag
cgcaaaatggaacctgatattgaaaaaatggataggacccctgagaaagacaaaatttca
tcatcaactgccccagccaaaaaaattaagctcaacagagaaactggtaaaaaaattggg
agtacagaaaatgtatctaatacgaaagaaccctctgaaaaattggagtcagcatctagc
aaagttaaacaagaaaaagtcaaaggaaaggtcagacgaaaagtagctggagctgaggga
tccagctcaactcttgtggattatacaagcacgagctcaactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaaacggactgtcattaaaactatggaagagtataat
aatgacaatacagctcctgctgaagacgttattattatgattcaggttcctcagtccaaa
tgggataaagatgactttgaatctgaggaagaagatgttaaggccacacagcctatgtca
agtgtaggaaaacctgccagtgttataaaaaatgttagcactaaaccgttaaatacagtc
aagtatactgaaaaagaaagtgagtcgtcagagaaaattcagaaactcaccaaggaagtt
ggccatgaaattatacagcatgagatcaagagttcaaaaaactctgcatccagtgaaaag
gggaaagccaaagatcgagatcattcggtgttggagaaggaaaaccccgaaaagaggaaa
aacagcactcagccagagaaagagagtaacttggaccgtctgagtgaaccaggaaatttt
aaaagtctgtctcaatcttccaaagagacaagaacttcagaaaagcatgattccgttcga
ggttcctcgactaaagacttcactcccaacagagacaaaaaaacagactatgacaacaga
gagtactcaagttccaaacgtagagacgaaaggaatgaattaacaagaaggaaagactcc
ccttctcgaagtaaagattctgcatctggacagaaaactaagccaagggaggagagagat
ttgcctaaaaaaggaacaggagattccaaaaagagcaattctagtccctcgagagacaaa
aaacctcatgatcacaaagccacttacgatacgaaacgctcgactgaagagacaaaatct
gtagataaaaatccttgtaaagatcgtgagaagcacacgttagaagcaaggaacaataaa
gaatcgggtggcaacaaattactgtatgtgcttaacccaccagacccgcagattgaaaag
gagcaagttactgggcagactgacaagagcgctgtcaagcctaagccacagttaagccac
tcctcccgactttcctccgacttaactagggaaactgatgaagctgcttttgaaccagac
tataatgaaagtgacagtgaaagcaacatatctgtaaaagaggaggaaacttcgggaaag
attgctaaggaactgaaagataaagtcgtggagaaagcaaaagacagcctggacacggca
gcagccagccaggtaggcaccgccaggagccagagtccaagcagccctagtgttagtcca
agcagaagtcatagcccttctggcagccggacccggagccacagcagtagtgccagctcc
gcagagagtcaggacagcaagaagaagaagaagaagaaggaaaagaagaagcacaagaaa
cacaaaaaacacaagaagcataagaagcatgcaggcactgaaggagagttagaaaaaagc
caaaaacacaaacacaagaaaaagaagtcaaagaagagcaaagataaagaaaaggagaag
gagaaagatgaccaaaaagcgaaatctgtccctgtataa
DBGET
integrated database retrieval system
