Prionailurus viverrinus (fishing cat): 125154159
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Entry
125154159 CDS
T09889
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04340
Hedgehog signaling pathway
pviv04360
Axon guidance
pviv05200
Pathways in cancer
pviv05205
Proteoglycans in cancer
pviv05217
Basal cell carcinoma
pviv05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125154159 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125154159 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125154159 (SHH)
05205 Proteoglycans in cancer
125154159 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
125154159 (SHH)
05217 Basal cell carcinoma
125154159 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pviv01002
]
125154159 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pviv00536
]
125154159 (SHH)
Peptidases and inhibitors [BR:
pviv01002
]
Cysteine peptidases
Family C46: hedgehog family
125154159 (SHH)
Glycosaminoglycan binding proteins [BR:
pviv00536
]
Heparan sulfate / Heparin
Morphogens
125154159 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
125154159
NCBI-ProteinID:
XP_047693901
LinkDB
All DBs
Position
A2:complement(167313118..167336411)
Genome browser
AA seq
732 aa
AA seq
DB search
MDSYDGSVMSLDKANSGLPPPDTAALAHRWPSPPVPGEREARGQREGDSGVRDEAPRSRP
PEDTVPGPEVRGTPLSWKDPKTALGPWTARQRWDRNHQARAGVSPHGSLAPSRPSRGRAA
RAFGGRVASSPAAAAGLRTGEACAHRRLDSSPGPGSWGRRRPTCGDRHQGQPVSQALQAC
YHLKSDSFCLLIAVSSPNSDVFRYQRPAACRSSPRLGGDRWPVSRSRGGQGYIGRERQAE
SEGARSKPERTGTHSRTQTRTGTAGRRWAPDEMLLARCMLAVFVSALLMCSGLGCGPGRG
FGKRRHPKKLTPLAYKQFIPNVAEKTLGASGRYEGKISRNSERFKELTPNYNPDIIFKDE
ENTGADRLMTQRCKDKLNALAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDIT
TSDRDRSKYGMLARLAVEAGFDWVYYESKAHIHCSVKAENSVAAKSGGCFPGSATVHLEQ
GGTKLVKDLRPGDRVLAADDQGRLLYSDFLTFLDRDDGAKKVFYVIETREPRERLLLTAA
HLLFVAPHNASAAGELEAPSGAGPPPGGAPGRRALFASRVRPGQRVYVVAERGGDRRLLP
AAVHSVTLREEATGAYAPLTAQGTILINRVLASCYAVIEEHGWAHRAFAPFRLAHALLAV
LAPARTDRGGDGDGGGGGHLPPPAPAAPEAPAAADAPGAAGIHWYSQLLYQIGTWLLDSE
ALHPLGMAVKSS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacagctacgacgggagcgtgatgtcattggacaaggcaaactctgggctcccaccc
ccagacacagccgccctggctcaccgctggccatcgccacccgtcccaggggaacgagag
gccagaggccagcgggaaggagattctggagtgcgagacgaggccccacgctcaaggcct
ccagaagacaccgttcccggtccggaggtccgaggaacgcccctctcgtggaaggacccc
aagacggctctgggcccgtggacggcgcgccagcgctgggatcggaaccaccaggcccgg
gcaggcgtcagcccacacgggagcctggccccgagccggccctcgcgcgggcgggcagcg
cgggccttcggtggccgggtggcctcctccccggccgcggccgctggcctgcgcacagga
gaagcttgtgctcatcggcgtctggactccagtcccgggccaggaagctggggacgcaga
cgccccacgtgcggggatcggcaccaagggcagcctgtctcgcaagctctccaggcttgc
taccatttaaaatcagactctttttgtcttttgattgctgtctctagccccaactccgat
gtgttccgttatcagcgaccagcagcctgccgctccagcccccgtctgggtggggatcgg
tggccagtctcccgcagccgcggcgggcaaggttatataggaagagaaaggcaggcagag
agcgagggagccaggagcaagccggagcgcacgggcacacactcgcgcacacagacccgc
acggggacagcgggaaggcgctgggctccggacgagatgctgctggcgagatgcatgctg
gcggtgttcgtctccgcactgctgatgtgctcggggctggggtgcggacccggcagggga
tttgggaagaggcggcaccccaaaaagctgacccctttagcctacaagcagttcatcccc
aacgtggccgagaagaccctaggggccagcggacgatacgaagggaagatctcgagaaac
tcggagcgattcaaggaactcacccccaattacaaccccgacatcatctttaaggatgaa
gaaaatacgggagcagaccgcctgatgactcagcgctgtaaggacaaactgaacgcgttg
gccatctcggtgatgaaccagtggcccggagtgaaactgcgggtgaccgagggctgggac
gaagacggccaccactcagaggagtcgctgcactatgagggccgcgcggtggacatcacc
acgtcagaccgagaccgcagcaagtacggcatgctggcgcgcctggccgtcgaggccggc
ttcgactgggtttactatgagtccaaggcgcacatccactgctccgtgaaagcagagaat
tcggtggcggccaaatccggcggctgcttcccgggctcggccacggtgcacctggagcag
ggcggcaccaagctggtgaaagacctgcgtcccggggaccgcgtgctggcggccgacgac
cagggccgactgctctacagcgacttcctcaccttcctggaccgcgacgacggcgccaag
aaggtcttctacgtgatcgagacgcgggagccgcgcgagcgcctgctgctcaccgccgcg
cacctgctcttcgtggcgccgcacaatgcctcggcggccggggagctggaggcgccgtcg
ggcgcggggccgccgccggggggcgcgccggggcgccgggcgctcttcgccagccgcgtg
cgcccgggccagcgcgtgtacgtggtggccgagcgcggcggggatcgccggctgcttccg
gccgccgtgcacagcgtgacgctgcgcgaggaggccacgggcgcgtacgcgccgctcacg
gcgcagggcaccatcctcatcaaccgggtgctggcgtcgtgctacgcggtcatcgaggag
cacggctgggcccatcgggccttcgcgcccttccgcctggcgcacgcgctcctggccgtg
ctggcgcccgcgcgcacggaccgcggcggggacggcgacggcgggggcggcggccacctg
cccccgcccgcgccggctgcgcccgaggcgccggctgcggccgacgcgccgggtgccgcg
ggcatccactggtactcgcagctgctctaccaaataggcacctggctgttggacagcgag
gccctgcacccgctgggcatggcggtcaagtctagctga
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