Prionailurus viverrinus (fishing cat): 125154352
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Entry
125154352 CDS
T09889
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03015
mRNA surveillance pathway
pviv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125154352 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125154352 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125154352 (CPSF4)
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125154352 (CPSF4)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125154352 (CPSF4)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125154352 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
125154352
NCBI-ProteinID:
XP_047694486
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All DBs
Position
E3:6820592..6833807
Genome browser
AA seq
269 aa
AA seq
DB search
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcatcgccagcgtggaccacatcaagtttgacttggagatcgcagtggag
cagcagctcggggcacagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgcgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccattccgccatatc
agtggtgagaagacggttgtgtgtaaacactggctgcgggggctgtgcaagaagggggac
cagtgcgagttcctgcacgagtacgacatgaccaagatgcctgagtgctacttctactcc
aagttcggggagtgcagcaacaaggagtgccccttcctgcacatcgaccctgagtccaag
atcaaggactgcccttggtacgaccgtggcttctgcaagcatggtcccctgtgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccagaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccgatgggaaccaccgagcagccccca
ctgccacagcagacgcagcctccgacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagagccccgcag
gtcatcggggtcatgcagagtcaaaacagcagcgcaggcaaccggggaccccggccgctg
gagcaggtcacctgttacaagtgtggcgagaaaggacactacgccaacagatgcaccaaa
ggccacttggcctttctcagtggacagtga
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