Prionailurus viverrinus (fishing cat): 125154425
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Entry
125154425 CDS
T09889
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125154425 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125154425 (RABGEF1)
Membrane trafficking [BR:
pviv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125154425 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
125154425 (RABGEF1)
BRITE hierarchy
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
125154425
NCBI-ProteinID:
XP_047694692
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All DBs
Position
E3:complement(15817257..15879836)
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AA seq
492 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQS
EFTQDFYQNVTERMQTRGKVPPEKVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQ
LNERQERIMSEAKKLEKDLIEWTDGIAKEVQDIVEKYPLEIKPPNQSLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtctgaacgccgtggaattcacgtggatcagtcggagctcctatgcaag
aaaggatgtggttactatggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagccaggcagaagcagattcaggaggattgggaactggcagagcga
cttcagcgggaggaggaagaggcctttgccagcagtcagagcagccagggggcccaatcc
ctcacattttccaagtttgaagaaaaaaaaaccaatgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcctcatccagggttggatcaaagaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagctgtttttggaagcaatgcattacaaaagggatttaagcattgaggaacaatca
gagtttactcaggatttttaccagaatgtgactgaaagaatgcagactcgtggaaaagtg
cctccggaaaaagttgagaagataatggatcaaatcgaaaagtacatcatgactcgtctc
tataagtatgtgttctgtccagaaactaccgatgatgagaagaaagatctcgctattcaa
aagaggatccgagccctgcactgggttacacctcagatgctttgcgtccctgttaatgaa
gaaatttccgaagtatctgatatggtggtgaaagcaatcacagatatcattgaaatggat
tctaagcgtgtacctcgagataagttggcctgcatcaccaagtgtagcaagcacatcttc
aatgccattaagatcaccaagaacgagccagcgtcagccgatgactttttacccactctc
atctacattgttttgaagggcaaccccccacgccttcagtccaatatccagtatatcacc
cgcttctgcaacccaagccgattgatgactggagaggatggctactatttcaccaatctg
tgctgtgctgtggctttcattgagaagttagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtccggccagacttctcccaggaagcaagaatctgagaattgg
tctcctgatgcttgcttaggggttaagcaaatgtataagaacttggatcttctgtctcag
ttgaatgaacggcaagaaaggatcatgagtgaagccaagaaacttgaaaaagacctcata
gagtggacagatggaattgcaaaagaggttcaagacattgttgagaaatatccactcgaa
attaagcccccgaatcaatctttagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccaccattgcaacctcaagtttatgcaggatga
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