KEGG   Prionailurus viverrinus (fishing cat): 125154437
Entry
125154437         CDS       T09889                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
pviv  Prionailurus viverrinus (fishing cat)
Pathway
pviv03020  RNA polymerase
pviv03420  Nucleotide excision repair
pviv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:pviv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125154437 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125154437 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125154437 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pviv03021]
    125154437 (POLR2J)
   03400 DNA repair and recombination proteins [BR:pviv03400]
    125154437 (POLR2J)
Transcription machinery [BR:pviv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     125154437 (POLR2J)
DNA repair and recombination proteins [BR:pviv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125154437 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 125154437
NCBI-ProteinID: XP_047694718
LinkDB
Position
E3:complement(9305038..9308539)
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcccgccttcgagtcgttcttgctcttcgagggcgagaagaagattacc
attaacaaggacaccaaggtacccaatgcctgtttgttcaccatcaacaaagaagaccac
acgctaggaaacatcattaaatcacagctgctgaaggacccccaggtgctgtttgcgggc
tacaaagtcccccaccccttggagcacaagatcatcattcgggtgcagaccacaccggac
tacagcccccaggaggccttcaccaatgccatcacagacctcatcagcgagctctcgctg
ctggaagagcgattccgggtggccatcaaagacaagcaagaaggcatcgaatag

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