Prionailurus viverrinus (fishing cat): 125154995
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Entry
125154995 CDS
T09889
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125154995 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pviv04147
]
125154995 (COPA)
Membrane trafficking [BR:
pviv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125154995 (COPA)
Exosome [BR:
pviv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125154995 (COPA)
Exosomal proteins of bladder cancer cells
125154995 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
125154995
NCBI-ProteinID:
XP_047695690
LinkDB
All DBs
Position
F1:62181349..62227557
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATDGLGDDALGRGQEEGGGWDVEEDLELPPELDVPPGAAG
GADDGFFVPPTKGTSPAQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLRLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLSYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQV
CKVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtacgaggcatcgacttccat
aagcagcagccgctgtttgtctctggaggagacgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacgttgcttgggcatttagactacatccgcaccacgttt
tttcatcacgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacagggcacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcggccagcctggaccagactgtgcgt
gtttgggatatttccggtctgaggaagaagaacttgtcccctggcgcagtggagtccgac
gtgagaggaatcaccggggttgatctgtttggaactacggatgcggtggtgaagcacgtg
ctggagggtcatgatcgcggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagatgaccgccaagtgaaaatctggcgcatgaacgagtcaaaggcgtgg
gaggttgacacctgtcgcggtcattacaacaacgtgtcttgtgccgtcttccaccctcgc
caagagctgatcctcagcaactctgaggacaagagcatccgcgtctgggatatgtccaag
aggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctggccgcccac
cccaacctgaacctctttgcggcaggccatgatggtggcatgattgtgtttaaactggaa
cgggaaaggccagcctacgctgttcacggcaatatgctacattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagcggtgatgcagctgcggagtggt
tccaagttcccggtgttcaatatgtcgtacaatccagcagaaaatgcagtcctgttgtgt
acgagagccagcaacttggagaatagcacctacgacctgtacaccatccccaaggacgcg
gattcccagaatcccgacgctcccgaagggaaacgatcctcaggcctgacggccgtttgg
gttgctcgaaaccggtttgctgtcctggatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgcgatgagatcttttatgctggc
acaggaaacctcctgctccgagatgcagaatccatcacgctctttgatgtacaacagaag
cggactctggcatctgtgaagatttccaaggtgaaatacgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgcgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgccgtcaccactggggactacgggatc
atccgaactctggatttgcccatctatgtcacgcgggtgaagggcaacaatgtgtattgc
ctggatagggagtgtcgtcctcgggtgctcaccattgatcccacggagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtgctgcacatggtgagaaatgcgaaacta
gttggccagtctatcatcgcttacctccagaagaagggctaccctgaggtggccttgcat
ttcgtcaaggacgagaaaactcgctttagcctggcactggagtgcgggaacatcgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctgggagaagtg
gccttgctgcaggggaaccaccagattgtggaaatgtgttatcaacgcaccaaaaacttc
gacaaactttctttcttgtaccttatcactggcaacctggagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgcactctacctgggt
gacgtgtctgagcgggtgcggatcctgaagaattgtgggcagaagtccctggcctatctc
acagctgctactcatggcttagatgaagaagccgagagcctgaaggagacatttgaccca
gagaaggagacgatcccagacattgaccctaatgccaagctgctccagccacctgcgcct
atcatgccattggataccaattggccgttactgactgtatccaaaggcttctttgaaggc
tccattgccggcaagggcaagggaggagccctggctgctgatattgacattgacaccgtt
ggtaccgaaggctggggagaggatgcggagctgcagctggatgaagatgggtttgtggag
gctacggatggcctgggggatgacgctcttggcaggggacaggaagaaggaggcggctgg
gatgtggaagaggacctggagctccctcctgagctggatgtaccccctggggcagccggg
ggtgccgacgatgggttctttgtgcctcccaccaagggaaccagcccagctcagatctgg
tgcaataactctcagcttccagtcgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcacgaccaggtgggggtgacccagtttggcccctacaagcaactgttccta
cagacctatgcccgaggccgcaccacctatcaggctctgccctgcctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcggggctgaagaatggcgtgccagccgtgggc
ctgaggctcaatgacctcattcagcggctacagctgtgctaccagctcaccacagttggc
aagttcgaggaggccgtggaaaagttccgttccattttactcagtgtgcccctcctcgtc
gtggacaataagcaggagattgcggaggcccagcagcttatcaccatttgccgtgagtac
attgtgggcctgtccatggagatagaaagaaagaagcttcccaaagagactctggaacag
cagaagcgcatctgtgagatggcagcctatttcacccactccaacctgcagcctgtgcac
atgatcctggtgctgcgcacggccctcaacctcttcttcaagctcaagaactttaagaca
gctgccacctttgctcggcgcctgttggaacttgggcccaagccagaggtggcgcaacag
acccgcaaaattctgtctgcgtgtgagaagaaccccacagacgcctgccagctcagctac
gacatgcacaacccctttgacatctgtgctgcatcttaccggcccatctaccgtgggaag
ccagtggagaagtgtccactcagtggggcctgctattcccctgagttcaagggtcaagtc
tgcaaggtcactacagtgacagagattggcaaagatgtcattggtttaaggatcagtcct
ctgcagttccgctga
DBGET
integrated database retrieval system
