Prionailurus viverrinus (fishing cat): 125155140
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Entry
125155140 CDS
T09889
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pviv03000
]
125155140 (SOX13)
Transcription factors [BR:
pviv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125155140 (SOX13)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125155140
NCBI-ProteinID:
XP_047695982
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All DBs
Position
F1:40159673..40171925
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AA seq
615 aa
AA seq
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MMSMRSPGSAQLALDGVGTMVNCTVKSEGKRELCHEALQASAAAAEPQLGDPARAPQDGA
DSQAPAQDCSSPESVGCLEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWKER
FLGRSSVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQ
QMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQ
LALPIQPIPCKPAEYPLQLLHSPPAPVVKRPGAVAAHHPLQEPSQPLNLTAKPKAPELPN
ASSSPSLKMNCGPRPPSHGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGT
LESSPNAPFRKDLISLDTSPAKERLEESCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRP
MNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEK
YPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDVLYP
RVAGVPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEAAEDRHSVADGEMYRYSEDEDS
EGEGKSDGELVVLTD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgaggagccctggctctgcccagctggccctggatggcgttggcaccatg
gtgaactgcactgtcaagtcagaagggaagagggagctctgccacgaggccctccaggcc
tcagccgctgccgctgaaccccagctgggagacccagcccgggctccccaggatggtgct
gactcccaagctccagcccaggactgcagctccccggagagcgttgggtgtctggaaccc
aagagaccgggaggttctgaggctgcttctggaagccaggagaagctggacttcaaccaa
aatttaaaagaagtcgtgccagccatcgagaagctgctgtccagtgactggaaggagagg
tttctgggaaggagctctgtggaaaccaaagatgtgaaagggacccaggagagcctggca
gagaaagagctccagctcctggtcatgatccaccagctgtctaccctgagggaccagctc
ctgacggcccattcagagcagaagaacatggctgccatgctgttcgagaagcagcagcag
cagatggagctggcccggcagcagcaggagcagatcgccaagcagcagcagcaactgatt
cagcaacaacataagatcaacctcctccagcaacagatccagcaggtcaacatgccttac
gtcatgatcccggccttccccccaagtcaccaacctctacctgtcacccccgattcccag
ctggccttgcccatacagcccatcccctgcaaaccagcggagtaccccctgcagttgcta
cacagcccccccgccccggtggtgaagaggcccggggccgtggctgcccatcaccccctg
caggagccctcccagcccctgaacctcacagccaagcccaaggcccccgagctgcccaat
gcttccagctcccccagcctgaagatgaactgtggaccccgcccccccagccatggggcc
cccacacgggacctacagtccagcccgcccagtctgccattgggcttccttggtgaaggg
gacgctgtcaccaaagccattcaggatgctcgacagctgctgcatggccacagtgggacc
ttagagagctcccccaatgcccccttccgcaaggacctcatcagcctggacacgtccccg
gctaaggagcggctggaggagagttgtgtgcaccccctcgaagaagccatgttgggctgc
gacatggatggctcccgccactttcctgagtcccggaacagcagccacatcaagaggccc
atgaatgccttcatggtgtgggccaaagatgagcgaaggaagatcctccaagccttcccg
gacatgcacaactccagcatcagcaagatccttggctcccgctggaagtccatgagcaac
caggagaagcagccctactacgaggagcaggcgaggctgagccggcagcacctggaaaag
tacccggactataagtacaagcctcggcccaagcgcacctgcatcgtggagggcaagcgg
ctgcgggtgggcgaatacaaagccctgatgaggacccggcgccaggacgcccgccagagc
tacgtgacccccccccaggccggccagctgcagatgagctcctccgatgtcctgtaccct
cgggtggcaggcgtgcccctggctcaacccctggtggagcactatgtgccccggagcctg
gaccccaacatgcctgtcatcgtcaacacttgcagcctcagggaggagggtgaggccgca
gaagacaggcactcggtggctgacggcgagatgtaccggtacagtgaggacgaggactcg
gagggcgaggggaagagcgacggggagctggtggtgcttacagactga
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