Prionailurus viverrinus (fishing cat): 125156101
Help
Entry
125156101 CDS
T09889
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125156101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125156101
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
125156101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Myb_DNA-bind_5
ResIII
AAA_34
TusA
Motif
Other DBs
NCBI-GeneID:
125156101
NCBI-ProteinID:
XP_047697753
LinkDB
All DBs
Position
F2:complement(41281402..41377818)
Genome browser
AA seq
1105 aa
AA seq
DB search
MVGKARSSNFTLSEKLDLLKLVKPYVKILEEHTNKHSVIVEKNRCWDIIAVNYNAIGVDR
PPRTAQGLRTLYKRLKEYAKQELLQQKETQSDFKSNISEPTKKVMEMIPQISSFCLVRDR
NHIQSANLDEEAQAGTSSLQVMLDHHPVAITVEVKQEEDIKPPPPLVLNSQQSDILEQRE
DHELVHVMERSLSPSLSSVDMRMTSSPSSIPRRDDFFRHERGEHFRSQLGYDPQILQMLK
EEHQIILENQKNFGLYVQEKRDGLKRRQQLEEELLRAKIEVEKLKAVRLRHDLPEFHSAP
KEITVPKRQEEEEPDSLVKYFSVVWCKASKKKHKKWEGDAVLIVKGKSFTLKDLEGKDIG
RGLAYKFKELEKIEEGHRVMIGGKEVEVMGIISPDDFNSGRCFQLGGGSLAISSSSQAAK
KCFSNPFKSVCKPSSKKNRPNGFQDCKPRHDPHAQNSLVMSRPDNNHQWMFNKNCSPIVD
VVIDPYLVYHLRPHQKEGILFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQC
QGPYGGKPIIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFPVDQDHKVEEFIKSPFYSV
LIISYEMLLRSLDQIKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQN
DLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRQPSASEEEKELGEKRAAELTCLTGL
FILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLGNSPHLICI
GALKKLCNHPCLLFNSIKGKECSSTWDENEERSLYEGLVNVFPADYNPLMFTEEESGKLQ
VLLKLLAVIRELRPTEKVVLVSNYTQTLNILQEVCRRHGYAFTRLDGQTPVSQRQQIVDG
FNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHI
YRLLTTGTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKNLFTLHESSHCVTHD
LLDCECTGDKDHTGDSLEKVPISRNCQLGPHHQKSSSLKPLSMSQLKQWKHFSGDHLNLT
DPFLERIRENVSFFFQNITNQSTVI
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaaaggctagatcttccaattttaccttatctgaaaagcttgatttgctaaag
cttgtgaagccatatgttaaaattctcgaagaacacactaataaacattcagtaatagtg
gaaaagaatagatgttgggatatcatagcagtaaactataatgcaattggagtagatcgc
cctcctcgaacagcccagggcctacgcaccctttacaaaaggctcaaagaatatgccaaa
caggagctattgcagcaaaaagagacccaatcagattttaaaagcaatatttctgagcca
accaagaaagttatggagatgattccccagatttccagtttttgcctggtaagagacagg
aaccacattcaaagtgcaaacttggatgaggaagcacaggctggtacgagttcactacag
gtaatgttggatcaccatccagttgctattacagtggaggtgaagcaagaagaagacatt
aagccccctcctccactggttttaaattctcaacagagtgatattttagagcaaagagaa
gaccatgaattagtacatgttatggaaagatctttgtcgccgtcactttcctctgttgac
atgagaatgacctcgtctccatcttctatcccaaggagagatgatttttttcggcatgag
cgtggagaacactttaggtcacagttagggtatgaccctcagattctgcaaatgctgaaa
gaagagcatcagataattttagaaaatcaaaaaaattttggattgtacgttcaggagaag
agggatggattgaaaagaaggcagcagctagaggaagagctgctaagagcaaaaattgaa
gtggagaagttgaaagcagttcgcttacggcatgatctgcctgaatttcactcagcccct
aaagaaattacagtgcctaagagacaagaagaggaagaacctgatagcctagttaaatat
ttcagtgttgtttggtgtaaggcttcaaagaaaaaacacaaaaagtgggaaggtgatgct
gttctcattgtaaaaggaaagtcatttacattaaaggatttggaaggcaaagacattgga
agaggccttgcatataaattcaaagagcttgaaaagattgaagagggccacagagtgatg
attggtggaaaagaagtagaagtcatgggcataatctctccagatgatttcaacagtggc
agatgttttcaacttggaggaggaagccttgctatctcaagttcttctcaggctgccaag
aagtgtttctctaaccccttcaaaagtgtttgtaaaccaagttcaaagaaaaatagacca
aacggtttccaagattgtaaaccacgtcatgacccacatgcacaaaattctcttgtaatg
tcacgaccagacaataatcaccagtggatgttcaataagaactgttctcctattgtggat
gtagtgatagatccttaccttgtatatcatcttcgaccacatcaaaaagaagggatcctg
ttcctatatgaatgtgtaatgggaatgagagtgaatggcagatgtggagctattcttgct
gatgaaatgggtttagggaaaacattgcaatgtatttcactcatctggactctacagtgt
cagggaccctatggaggcaagccaataataaagaagacacttattgtcacacctgggagc
ttggtgaataattggaggaaagaatttcaaaaatggctaggaagtgaaaggatcaagata
tttcctgttgatcaggaccacaaagtagaagaattcatcaaatctccattttattctgtt
cttatcatcagttatgaaatgttacttcgttccttggatcaaattaagaatgttaaattt
gatcttctaatctgtgatgaagggcatcgtttgaagaatagtgccattaagacaactaca
gccctcattagcctttcttgtgagaaaagaataattctaactggtactccagttcagaat
gatcttcaagaattttttgcattaattgattttgtaaatccaggaatattaggctctttg
tcatcttatagaaaaatatatgaagaacccatcattttatcgagacaaccttctgcttct
gaggaagaaaaggagttaggagagaaaagagcagctgaacttacttgcctcactggactc
tttatccttagaagaacccaagaagtcataaataagtatcttccacctaaaatagagaat
gtagtcttttgccgaccaggagcactacagattgagctttatcgaaagctgttgaattct
caggctgtcagattctgccttcaagggttgttaggaaatagtcctcatctaatatgtata
ggagctctcaaaaagctgtgcaatcacccctgccttttgttcaactctataaagggaaaa
gaatgtagctcaacgtgggatgaaaatgaagaaaggagtctatatgaaggcttggtaaat
gtgttccctgctgattacaaccctctcatgtttaccgaggaagagtcaggaaaactccaa
gtgctgttgaagctcttagccgttatccgtgaacttcgtcccactgaaaaggtggtgttg
gtgtccaactacacacaaaccttgaatattctacaagaagtatgcaggcgtcatggatat
gcttttacaagacttgatggacaaacaccagtctctcaaagacagcaaattgttgatggc
tttaatagtaaatactcttctgattttatttttttgttaagttcaaaagctggtggtgtg
ggacttaaccttattggaggatctcacttaattctgtatgatattgattggaatccagcc
actgatatccaggcaatgtctagagtatggagagatggtcagaaacatcctgtacatatt
tacagactcctaaccacaggtacaatagaagaaaagatttatcagagacaaatcagtaag
caagatctttcaggggcagttgtagacctaaccaagacctctgaacatatccagttctca
gtagaggagcttaaaaatttgtttacattacatgaaagttcacattgtgttacccatgac
ctgcttgactgtgaatgtacaggagacaaagatcatacaggtgattcattggagaaagtc
cctatctctagaaattgtcagcttggtccacatcaccagaagtctagctctctgaaacct
ctctccatgtcacagctgaagcaatggaaacatttttctggagatcatttaaatcttaca
gatccttttcttgaaagaataagagaaaatgtctcattcttttttcagaacataaccaac
caaagtactgttatataa
DBGET
integrated database retrieval system
