Prionailurus viverrinus (fishing cat): 125157101
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Entry
125157101 CDS
T09889
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03008
Ribosome biogenesis in eukaryotes
pviv03013
Nucleocytoplasmic transport
pviv03015
mRNA surveillance pathway
pviv05014
Amyotrophic lateral sclerosis
pviv05164
Influenza A
pviv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125157101
03015 mRNA surveillance pathway
125157101
03008 Ribosome biogenesis in eukaryotes
125157101
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125157101
05168 Herpes simplex virus 1 infection
125157101
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125157101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125157101
03009 Ribosome biogenesis [BR:
pviv03009
]
125157101
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125157101
mRNA cycle factors
Stress granule specific factors
125157101
Ribosome biogenesis [BR:
pviv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125157101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
TAP_C
E217_gp28
Motif
Other DBs
NCBI-GeneID:
125157101
NCBI-ProteinID:
XP_047699280
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All DBs
Position
X:75650633..75668690
Genome browser
AA seq
537 aa
AA seq
DB search
MGHNNTGNSLQRRARCSGIYRRRHNNWSGHVRSGIDSSSHQQQDGDPATNDSRMSTRGRY
APYAIPSCHWRGSFQIQDQTQANMEGEQKHPETRMEGERQDETSRSWFKITIPFGIRYDE
KWLLNLIQKQCSVPFTPVEFHYEKMQAQFFVENAGIAFALKSVNGKIWNENNEMISIFFH
PSDAPQSVQKELKPENVDQIKLTTNKRYVVSXQSLNIQRVRFAPDMVTRDIEMVPNPRNS
MAASRQTHEKNMFKSAGELDKGKRLQREDMSANRSPLCTTFPDKSTNISSILELFSKLLC
LDGQESPSPTSVGIAAHKRLPTCKGSFFGSDALKSLVLQFLQQYYLIYDSGDHQGLLGAY
HDEACFSRTIPFNPKEPAPSSLCEYLKESRNMKKVQDPYLRVQLLKHTKHDIVHSLCVLP
KTQHDLSSFVVDIWFQMDLMLCFSVNGVLKEVEGMSQDSVRAFTRTFIANPVNNYSLCIM
NDTLLVNIISPKDTMSTFSIPVPTPSCSYSNTFSQKQQGMVQSFTTQSGMNLQWSKK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggggcataataacacaggcaactccttacaaagaagagcaagatgctcgggtatttac
cgacggaggcataacaattggtctgggcatgtccgttctggcattgattcttcatcccac
cagcagcaagatggagatccagcaacaaatgacagtcgcatgagcacccgaggaagatat
gctccctatgccattccatcctgtcattggagaggcagttttcagatacaagaccaaacg
caagctaacatggagggagagcaaaagcatccagaaacaagaatggagggggagaggcag
gatgagacctccaggagctggttcaagatcacaattccatttggcatcagatatgatgag
aagtggctgctgaatctgattcagaagcaatgcagtgtccccttcaccccagtggaattt
cactatgagaaaatgcaggcccagttctttgttgagaatgccggcattgccttcgcattg
aagagtgtcaacggcaagatctggaatgagaataatgaaatgatatctatctttttccac
ccctctgatgcaccccagtctgtgcagaaggagctgaagccagaaaatgtggatcagata
aagttgaccacaaacaaaagatatgtagtctcctaacaatctcttaacatccagagggtc
cgctttgcccctgacatggtcacccgagatattgaaatggtaccaaatcctagaaacagc
atggctgcctcccggcagactcatgaaaagaacatgttcaagtctgcaggggagttggac
aagggcaaaagactgcagcgagaagacatgagtgcaaacagaagccccctgtgcaccacc
tttcccgataaatcaaccaacataagctccatcctggaactgttttccaagttattatgc
ctggatggccaggagtcaccttcaccaaccagcgttggtattgcagcccacaagaggtta
ccaacctgcaagggaagcttctttggatctgatgcactgaagagtctggtcctgcaattc
ctgcagcagtactacttgatctatgactctggagaccatcagggtctcctcggtgcttac
cacgatgaggcctgcttctcccggaccattcccttcaaccccaaggagccagccccaagc
agcttgtgtgagtacctcaaggaaagcaggaacatgaagaaggtccaggacccctacctg
cgtgttcagctgctgaagcatacaaaacatgacattgtgcactccctctgtgtgctgccc
aaaactcagcatgacctcagctcctttgtggtggacatatggttccagatggacttgatg
ctctgcttctctgtcaacggagtgctcaaggaagtggaaggaatgtctcaggattctgtt
cgtgccttcacccggaccttcattgctaaccctgtcaacaattacagtctatgcatcatg
aatgatactctgcttgtgaatatcatcagccctaaggataccatgagcacattctctatc
ccagttcccactccctcctgcagctactcgaacaccttttcccagaagcagcagggaatg
gttcagtctttcaccacacagtctgggatgaacctccaatggtctaagaagtga
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