Prionailurus viverrinus (fishing cat): 125157128
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Entry
125157128 CDS
T09889
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04613
Neutrophil extracellular trap formation
pviv05014
Amyotrophic lateral sclerosis
pviv05034
Alcoholism
pviv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125157128 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125157128 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125157128 (HDAC6)
09165 Substance dependence
05034 Alcoholism
125157128 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pviv01009
]
125157128 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125157128 (HDAC6)
04131 Membrane trafficking [BR:
pviv04131
]
125157128 (HDAC6)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125157128 (HDAC6)
Enzymes [BR:
pviv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125157128 (HDAC6)
Protein phosphatases and associated proteins [BR:
pviv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125157128 (HDAC6)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125157128 (HDAC6)
Membrane trafficking [BR:
pviv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125157128 (HDAC6)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125157128 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125157128
NCBI-ProteinID:
XP_047699341
LinkDB
All DBs
Position
X:39326725..39350017
Genome browser
AA seq
1136 aa
AA seq
DB search
MTSTGQDSTSTRQRRSRHNPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLS
QAAEQDLIMDLRRLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
LASLCCALEALEPFWEVLVRSVETPEEDILEEDSAEEKDEEGLWRPPALPILTWPMLQAR
TGLVYDQRMMGHHNLWDNHHPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAELLTCH
SAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLN
GTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIF
EEDPSVLYISLHRYDHGTFFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVE
DKEEPSLSKSVTNPGSAKRMTTPEGNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQ
DQSLEAPTQKAILDQTTSQAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPE
QGATSQISPSELIENLRTLELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANT
DQAIFYAVTPLPWCPHLVAVCPTPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSA
HMLQHHEGSGHPLVLSYADLSTWCYSCEAYVHHQALLEVKNIAHQNKFGEDMPHSH
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgccata
ctctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaaccttgaggcc
aagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgaacggctccatgccatcaaggaacagctgatc
caggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaaggacgaa
ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat
gagagagagctccgcatcctagcagacacctatgactcagtttatctacatccgaactcc
tatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtcctgggg
aaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgctcaacag
aagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaaggaacc
cagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttatgagcag
ggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggtcatggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactatatt
gctgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccaccactcca
gcagggttcgctcagctaacccacttgctcatgggtctggcagaaggcaaactgatcctg
tctctggagggtggctacaaccttcgctccttggctgagggtgtcagtgcctcactccac
acccttctgggagacccttgccccatactggagtcccctggcgccccctgcccaagtgcc
ctggcgtcactgtgctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagttgagaccccggaggaggacatcctggaggaggatagcgcagaggagaaggatgaa
gagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacaggctcgc
acagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaaccaccac
ccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggccttgcg
gggcgctgcctcgcgctgcccgcacgtcccgccacggaagccgaactgctcacctgccac
agtgctgagtacgtgggtcgtctgcgggccacagagaagatgaaaacccgggagctgcac
cgcgagggttccaactttgattccatctacatctgccccagcacctttgcctgtgcgcag
ctggccactggcgccgtctgccgcctggtggaggctgtgctggcaggagaggttttgaat
ggtaccgctgtggtgcgtcccccaggacaccatgctgagcgggatgctgcttgtggtttc
tgcttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcaggcg
ctgcggatcctgatagtggactgggatgtccatcatggtaatggaactcagcacatattt
gaggaggaccccagcgtactgtacatttccctgcaccggtatgaccatggcaccttcttt
cccatgggggaggagggtgccagcagccagataggccgggccgcaggcactggcttcact
gtcaacgtggcctggaatggaccccgtgtgggtgacgctgactacctggccgcgtggcat
cgcctggtgcttcctattgcctacgagtttaacccagagctggtgctggtctcagcgggc
tttgacgccgcatggggggacccactggggggctgccaggtgtcacctgagggctatgcc
cacctcacccacctgctgatgggccttgccaatggccgcattatcctaatcctagagggt
ggctataacctgacatccatctcggaatccatggctgcctgtacccgctccctccttggg
gacccaccaccactgctgaccttgtcgcggcctccactatcaggggccctggcctcaatc
accgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtggaa
gacaaggaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaagaggatg
accacaccagaagggaacattctggatgcaggcacagagaaggctgtctcagcatcatct
gtggaagagtccactctaggccaacctaagtcagagactgctatggtggagctcagtcag
gaccagtccttggaggctcccacacagaaagccatactggaccagaccacctcacaggca
gccacagtggaggccacagcaggccagaccacctcagaggaggctgttgggggagctgag
atgatccaaacccctccagctttatgtactgacaaccagactcccacagcctcacctgag
caaggtgccacatcccaaatatcccccagtgagctgattgagaatctcaggaccttggaa
ctaaactgcaaggctcaggaggcaccagaatctcagatcccagaagaggataagctactg
ggagaggcagctggaggtcaggacatgctgattcagagctttggggtccatgctaacact
gaccaggccatcttttatgccgtgacaccactgccctggtgtccccatttggtggcagta
tgtcccacacctgaatcaggcctggacgtgacccaaccttgtcaggactgtggaacactc
caggagaactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtcagtgcc
catatgctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgccgatctg
tctacctggtgttacagctgtgaggcctatgtccaccaccaggctctcctagaagtgaag
aacatcgcccaccagaacaagtttggggaggacatgccccactcacactga
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integrated database retrieval system
