Prionailurus viverrinus (fishing cat): 125157276
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Entry
125157276 CDS
T09889
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pviv04990
]
125157276 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
pviv04990
]
Other domain-containing proteins
Patched domain-containing proteins
125157276 (PTCHD1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
125157276
NCBI-ProteinID:
XP_047699788
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All DBs
Position
X:16382457..16431946
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTRIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAVQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTITLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEALQEKPAWYRFLLTARFSEDTTDGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWLTLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYLVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggctcggccacttc
attgccagtcatccggtcttcttcgcctcggcgcccgtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctgctggcgccccagcac
agcctcgccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaaa
caccgactctactcggacctgcagacccccgggcgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacactgacctgatcttaaagttgcatgct
gctgtgaccaggatccaggttccaaggcctggttttaattacacgttcgcccacatatgt
atcctgaataatgataagacttgcatcgtggatgacatagtgcatgttctggaggagcta
aagaatgctcgggccaccaaccggaccaattttgctatcacatacccaatcactcactta
aaggacgggagggcggtgtacaacggacaccagcttggaggcgtcactgtgcacagcaag
gaccgggtcaagtccgcagaggccgtccagctcacctactacctgcagtcaatcaacagt
ctcaacgacatggtggctgagaggtgggaatccagcttctgcgacactgtccgactattc
cagaaatccaacagcaaagtcaaaatgtacccttacacgtcctcctcactgagggaagat
ttccagaagaccagccgcgtatcagaacgttacctggtcaccagcctgatcctggtggtc
actatggccatcctgtgctgctctatgcaggactgcgtccgcagcaaaccctggctaggc
ctgctcgggctggtgactataaccctggccactctcaccgcggccgggatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaagagagaactgcagcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcttcttcaactacctctatgtactctcgttt
tatggttccagcctggtattcactggctacatagaaaacaattaccagcatagtatcttc
tgtagaaaagtcccaaagcccgaggcattgcaggagaagccggcatggtacaggtttctc
ctgacagccagattcagcgaggacacaactgatggcgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacattgtagcaaccgcgacgcaaaccattgag
tacactactgcccagcaaaagtactttagtaactacagtccggtgattgggttttacata
tatgagtccatagagtactggaacactagcgtccaagaagatgtgctagaatacaccaag
gggtttgtgcggatatcctggtttgagagctatttaaattaccttcggaaactcaatgtg
tccactggcttgcctaagaaaaatttcacagacatgttgagaaattccttcctgaaagct
ccccaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtggcctccagaatgtttttggtggccaagaccatggaaactaacagagaagaa
ctctacgatctcctggagaccctcaggagactttctgtcacctccaaggtgaagttcatt
gtcttcaacccgtccttcgtgtatatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagat
tctctgattaacgtctggctcactctcacggttgtgtccgtggagtttggagttataggt
ttcatgacattatggaaagtagaactggactgcatttctgtgctatgcttaatttatgga
attaactacacaattgacaactgtgctccactgttatccacattcgttctgggcaaggat
ttcacaagaactaaatgggtaaaaaacgccctggaagtgcatggggtagccattttacag
agttacctctgctatcttgttggtctgattcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctcgaagaaaaaaaggaaagagaagaaa
aaccctgaaaaccgggaggaaattgaatgtgtggaaatggtggatattgacagtacccga
gtggttgaccaaattacaacagtgtga
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