Prionailurus viverrinus (fishing cat): 125157295
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Entry
125157295 CDS
T09889
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04151
PI3K-Akt signaling pathway
pviv04382
Cornified envelope formation
pviv04510
Focal adhesion
pviv04512
ECM-receptor interaction
pviv04820
Cytoskeleton in muscle cells
pviv04926
Relaxin signaling pathway
pviv04933
AGE-RAGE signaling pathway in diabetic complications
pviv04974
Protein digestion and absorption
pviv05146
Amoebiasis
pviv05165
Human papillomavirus infection
pviv05200
Pathways in cancer
pviv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125157295 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125157295 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125157295 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125157295 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
125157295 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
125157295 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
125157295 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125157295 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
125157295 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125157295 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
125157295 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125157295 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pviv04147
]
125157295 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
pviv00536
]
125157295 (COL4A5)
Exosome [BR:
pviv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125157295 (COL4A5)
Glycosaminoglycan binding proteins [BR:
pviv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125157295 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125157295
NCBI-ProteinID:
XP_047699819
LinkDB
All DBs
Position
X:81783854..82022935
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AA seq
1691 aa
AA seq
DB search
MQLRGISLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGSPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGS
IGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPGLSIPG
SPGLDGQPGAPGLPGPPGPPGPQIPPSDDICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGPTGPKGLTGIPGVPGPPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGKLGPKGDRGFP
GPPGPPGRAGLDGLPGPKGDIGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPVGQPGLHG
IPGEKGDPGPPGFDVLGPPGERGSPGIPGAPGPMGPPGSPGIPGKAGVSGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDNGLQGQPGPPGPVGEKGGKGEPGLPGPPGPMDPDML
GSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGHPGLPGFPGTPGLPGPKGISGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGSPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGDPGPQGPP
GRPGPTGFQGLPGPEGPRGLPGNGAIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPSGIPGSTGPEGDPGLVGPPGPPGLPGPSGQSIIIKGD
VGPPGIPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKG
RSIQPFISRCAVCEAPSMVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgtggaatcagcctggctgccggcttgttcttactggccctcagtctttgg
gggcagcctgcagaggctgcggcttgctatggttgttctccaggatcaaaatgtgactgt
agtggtataaaaggagaaaagggggagagagggtttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccacgatggagccccaggacctcaaggt
atcccaggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcgctgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccaaggacccaagggtgaaaagggtgagcaaggccttcagggcccccctgggcca
cctggacagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccgggtcct
ccaggtggtgtgaaaggtgagaaaggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatgggcagccaggaattccaggtttacctggtgatcctggttcc
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggc
cctcctggacttgtaatccctaggcctgggactggtgtaactgtgggagaaaaaggaagc
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacccggcctccctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggactttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcaaatccctcctagtgatgatatatgtgaagcaggccctccaggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcaacctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtccaaccggtcccaaaggattaacaggcataccgggagttccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagcccccgggcttcctggtttacccggtacccctggacag
gatggactaccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggcccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
caacccgggaagcctggtctgcctggtaacccaggaagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacccggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctacctgggccacctggg
cccccaggactaccaggtttcaaaggaaaacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcctccagggcgtgctggcttggatgggcttcctggaccaaaaggtgat
attgggccaaatggacaacctgggccaatgggacctcctgggcttccaggaataggtgtt
cagggaccaccagggccaccagggattcctggaccagtaggccaacctggcttacatgga
ataccaggagagaaaggagatccaggacctcctgggtttgatgttctaggaccccctggt
gagagaggcagtccaggaattcctggagcacctggtcctatgggacccccaggatcacca
gggattccaggaaaagcaggtgtctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgataatggtttgcagggtcagccaggacctcctggccctgtaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccaatggatccagatatgctg
ggctcaaaaggagagaagggggaccctggattaccaggtattcctggagtttcgggacca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcattggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatatccaggaaacccgggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacatccaggcctt
cctggattccctggaaccccaggacttcctggaccaaaaggtattagtggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggcggtcgtcctgggccacca
gggcctccaggtgaaaaaggcagtccgggtcaagatggtatccctggcccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggacttcctggt
ccaaagggagaaccaggctttcagggttttcctggtgtgcagggtcctccaggccctcct
ggttctccaggtccagctctagaaggccctaaaggcgaccctgggccccaaggtcctcct
gggagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtccccggggtctc
cctggaaatggagctattaaaggagagagaggaaacccaggccaacctgggcaacctggt
ttgcctggtttgaaaggagatcaaggaccaccaggactccagggtaatcctggtcggcca
ggtctcaatggaatgaaaggagatcctggtctcccgggtgttccaggatttccaggcatg
aagggacccagtggaatacctggttcaactggccctgaaggggatccaggacttgttggc
cccccaggtccccctggattacctggtccttcaggacagagtattataatcaaaggagat
gttggtccaccagggatcccaggccagcctggattaaaaggtctaccaggactaccagga
ccacaaggcttaccaggtccaattggccctccaggagatcctggacgcaacggactccca
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggccagccaggtacc
cgtggtttggatggtccccctggaccagatggattgcagggtcccccaggccccccagga
acctcctctattgcccatggattcctcatcacacgtcacagccagacaacagacgcacca
caatgcccacatggaactgtccagatttatgaaggcttttctctcttgtatgttcaagga
aataaaagagctcatggtcaagacttggggacggctggcagctgccttcgtcgcttcagt
accatgcctttcatgttctgcaacatcaataatgtttgcaactttgcttcaagaaatgac
tattcttactggctgtccaccccagagcccatgccaatgagcatggaacccctgaagggc
cggagcatccagccattcattagtcgatgtgcagtatgtgaagctccctccatggtgatt
gcagttcacagtcagaccatccagattccccactgtcctcagggatgggattctctctgg
attggctattccttcatgatgcatacaagcgcaggagcagagggctcaggtcaagccctg
gcctcccctggttcctgcttggaagagttccgttcagctcctttcattgaatgtcacggc
cggggtacctgcaattactatgccaactcctacagcttttggctagcaactgtagatatg
tcagacatgttcagcaaacctcagtcagaaacgctgaaagcaggagacttgaggacacga
attagccgatgtcaagtgtgcatgaagaggacataa
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