Prionailurus viverrinus (fishing cat): 125157487
Help
Entry
125157487 CDS
T09889
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03018
RNA degradation
pviv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125157487 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
125157487 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125157487 (LSM4)
03041 Spliceosome [BR:
pviv03041
]
125157487 (LSM4)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125157487 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
125157487 (LSM4)
Spliceosome [BR:
pviv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125157487 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125157487
NCBI-ProteinID:
XP_047700213
LinkDB
All DBs
Position
A2:complement(12932439..12946248)
Genome browser
AA seq
153 aa
AA seq
DB search
MGRPRPERGDPAKGPLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICT
SRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGG
AGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggggagaccgaggcctgagagaggggacccggcaaagggtccgcttcccttgtcactg
ctgaagactgctcagaatcatcccatgctggtggaactcaaaaatggagagacatacaat
gggcacctggtgagctgtgataactggatgaacattaaccttcgagaggtgatctgcaca
tccagggatggggacaagttttggcggatgcccgagtgctacatccgtggcagcacgatc
aagtacctgcgcatacctgatgagatcatcgacatggtcaaggaggaggtggtggccaag
ggccgtggccgcggtggcctgcagcagcagaagcagcagaagggtcgaggcatggggggt
gctgggcgaggtgtgtttggtggccggggccgaggtgggatcccaggcacaggcagaggt
cagccggaaaagaagccgggcaggcaggcgggcaaacagtga
DBGET
integrated database retrieval system
