Prionailurus viverrinus (fishing cat): 125158307
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Entry
125158307 CDS
T09889
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125158307 (TAF1B)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125158307 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
CoV_NSP2_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
125158307
NCBI-ProteinID:
XP_047701176
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDLEEAKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVINTGAIPNTKIQAINR
GLKRKRKLERGWDWYVCEGFQHILYQQAEALKTLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVWRRKVTVLEDNQSHSDWESEPELLSDFSCPSFVESGTESQPDGLAQKPFPISKAS
QSETASICSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETVTLSDLLRFVEEG
HVPYVNAFQHFPEEMKLYGRDKGIFAIESWPTYEDIYKKMIEIAKFLDLPRFPDITEDCY
LHPNILCMKYLMEVNLPDEMNDLTCQVVKMTGVGEVDFLTFDPIAKMAKTVKYDVQAVAV
IVVVLKLLFLLDDNLEWSLSNTAEKYNENNKEDKPWFDFRKWYQVMKKSIDEKKQEWEEA
RAKYLWKSEKPLYHSSIDRAVAFKRREMVVDLQKQFSTLVDSTPTVGRKKPSSFQFNWAE
GDSARTCFHGHSLQGILKNKGQSLTTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSYQF
IINLFAFLLRIKTSFLHEEVSLIEKRLFKTKYSKTKKKSSRSRKGRKY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgaaagaattcaaagaaagatgcactcagtgtgctgctgtctct
tggggtcttactgatgaaggcaaatattactgcacttcttgccacaacgttacagaaaga
tcaaaggaagtcataaacactggggctattcctaatacgaaaatacaagccatcaaccgg
ggacttaaaagaaaaagaaaacttgagagaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttatcaacaagcggaagccttaaagacccttggagtgggcccagaacta
aagaatgaagttttacataatttttggaagcgctaccttcagaagagcaagcaggcctat
tgtaaaaacccagtttggagaagaaaagttacggtattagaagataaccaaagtcattca
gactgggagagtgagcctgagctgctgagtgacttcagctgcccttcttttgttgaaagt
ggaacagagtctcagcctgatggccttgctcagaagcctttccccatcagcaaagcatca
caatcagaaacagcctccatctgttctggatctcttgatggagtggaatattcgctacga
aaggagaaggggatcgtgaagatgacggtgccgaggacacttgccttctgctacctgtca
ctgctgtggcagagagagacagttactctctcagatcttttgagatttgttgaagaggga
catgttccttacgtaaatgctttccagcattttccagaagagatgaaattatatgggcgt
gacaaaggaatctttgctatagagtcttggcctacctatgaggatatctataaaaagatg
attgaaattgccaaattcttagatttgccacgttttccagacataactgaagactgctat
cttcatccaaacatcttgtgtatgaaatacttgatggaagtcaatctccctgatgaaatg
aatgatttaacctgccaagtggtaaaaatgactggagtaggagaagtcgattttctgaca
tttgaccccatagctaaaatggcaaaaactgttaaatatgatgtacaagctgtcgccgtt
atcgtagtagtattgaaactgctctttttattggatgacaatttagaatggtctttgtct
aatactgctgagaaatataatgaaaacaacaaagaagataagccatggtttgatttcaga
aaatggtaccaagttatgaagaaatctattgatgagaaaaaacaagaatgggaggaagcc
agggcaaagtacctgtggaaaagcgaaaagccactctaccactcatccattgacagagca
gtggcatttaaaagaagagaaatggtggtggatctacaaaaacaatttagcacattggtt
gattcaacaccaactgttggaagaaaaaagccttcaagttttcagttcaactgggctgaa
ggagactcggctagaacctgtttccacggacacagcctccaggggatcctgaagaacaaa
ggccagtcactgacaaccaagaactcactctactggctaagtacacagaaattctgtaga
agctattgtaaacatgtgacgacctatgaagaatcaaatttttctctgagttatcagttt
ataataaacctcttcgccttcctgctaagaataaagacctcttttctccatgaagaagtg
agcttaattgaaaagagacttttcaaaacaaaatacagtaaaacgaaaaagaaatcttca
agatccaggaaagggagaaaatactga
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