Prionailurus viverrinus (fishing cat): 125158410 Help Entry 125158410         CDS       T09889                                  Symbol PBRM1 Name (RefSeq) protein polybromo-1 isoform X1   KO K11757   protein polybromo-1 Organism pviv  Prionailurus viverrinus (fishing cat) Pathway pviv03082   ATP-dependent chromatin remodeling pviv05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:pviv00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     125158410 (PBRM1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     125158410 (PBRM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pviv03021]     125158410 (PBRM1)    03036 Chromosome and associated proteins [BR:pviv03036]     125158410 (PBRM1) Transcription machinery [BR:pviv03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      125158410 (PBRM1) Chromosome and associated proteins [BR:pviv03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     125158410 (PBRM1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 Motif Other DBs NCBI-GeneID:  125158410 NCBI-ProteinID:  XP_047701384 LinkDB All DBs Position A2:complement(20468621..20584340) Genome browser AA seq 1724 aa AA seqDB search MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD EDDDDDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI FYMKKAEIEHHEMAKSSLRMRTPSNLATARLTGPSHSKGSLSEERNPTSKYYRNKRTVQG GRLSAITMALQYGSESEEDALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQ GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK RYNVPNSAIYKRVLRLQQVMQAKKKELARRDDIEDGDSMISSATSDAGSAKRKRNTLDSE MLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEP MDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKEL GPLPDDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFL RLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLI YKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLA EIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDA VELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEK REAEKSEDSSGTAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEASLQPHIVCIERLWE DSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFK LCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANAD KGDDEKNTDNSEDSRTEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVF IKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCP MTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVD DEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQL QTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYS FGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMG VVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPP GVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPV IQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQE SRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL NT seq 5175 nt NT seq  +upstreamnt  +downstreamnt atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat tccatgggttccaagagaagacgagctacctccccttctagtagtgtcagcggggacttt gatgacgggcaccattctgtatccacaccaggcccaagcaggaaaaggaggagactttcc aatcttccgactgtagatcctattgctgtgtgccatgaactctacaacaccattcgagac tataaggatgagcagggcaggctactctgtgagctcttcattagggcaccaaagcgaaga aatcagccagactattatgaagtggtttctcagcccattgatttgatgaaaatccaacaa aagttaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccagctcctt tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat gaagatgatgatgacgatgggcaagacaatcaaggcacagtgactgaaggatcttctcca agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca tcaggacgtctcattagtgagctttttcagaaactgccttctaaagtgcaatatccagat tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat ggaagctacaagagcattcatgcaatggccaaagatatagatctcctagcaaaaaatgcc aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctataaaaaaaata ttttatatgaaaaaggcagaaattgaacatcatgaaatggctaagtcaagccttcgaatg aggactccatcaaatttggccacagccaggctgacaggtccttcacacagtaaaggcagc cttagtgaagagagaaatcccactagcaagtattaccgaaataaaagaacagtccaaggg ggtcgtttgtcagcaattaccatggcacttcagtatggctcagaaagtgaggaggatgct ttagctgctgcacgttacgaagaaggagagtcggaagcagagagcattacttcatttatg gatgtttcaaatcctttttatcagctttatgacacagttaggagctgtcggaataaccaa gggcagcttatagctgaacctttttttcatttgccttcgaagaaaaaataccctgattat tatcagcaaattaaaatgcccatatccctacaacagatcagaacaaagctcaagaaccaa gaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgccaag cgctataatgttcccaactcagccatctacaagcgggtcctaagattgcagcaagtcatg caggcaaagaaaaaggagcttgccaggagggacgacattgaggatggagacagcatgatc tcttcggccacctctgacgctggtagcgcgaaaagaaaaaggaacactcttgacagtgag atgttgggtctcaggaggctctccagtaaaaagaacataagaaagcagcgaatgaaaatc ttattcaatgttgttcttgaagctcgtgagccaggttcaggcagaagactttgtgatcta tttatggttaaaccatccaaaaaggactatcctgattattataaaatcatattggagcca atggacttgaaaataattgaacataacatccgcaatgacaaatacgcaggggaagaggga atgatagaagacatgaagctgatgttccggaatgccaggcattacaacgaggagggctcc caggtgtacaacgatgcacacatcctggaaaagttactcaaggataaaaggaaagagctg ggcccactgcctgatgatgatgacgtggcttctcccaaactcaagctgagtaggaagagt ggaatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactaaatgaagtc tatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatatttctg aggcttccctctagatctgagctgcctgactactacctgaccattaaaaagcccatggac atggaaaaaattcgaagtcacatgatggccaataaataccaagatatagactccatggtt gaggacttcgtcatgatgtttaacaatgcgtgtacatacaatgagcctgagtctttgatc tacaaagatgctcttgtcctgcacaaagtcctgcttgaaactcggagagacctggaggga gatgaggactctcatgtcccaaatgtgaccttgctgattcaagagcttatccacaatctt tttgtgtcagtcatgagtcatcaggatgatgagggaagatgctacagtgattccttagca gaaattcctgctgtggatcccaactttccaaacaaacctcctcttacttttgacataatt agaaagaatgttgaaaataatcgctaccggcggcttgatttatttcaagagcatatgttt gaagtcttggaaagggcaagaaggatgaatcggacagactctgaaatatatgaggatgcg gtggagctgcagcagttttttattaaaatccgtgatgagctctgcaaaaatggggagatc ctcctatcaccagcgctcagctacaccacgaagcacttgcataacgacgtggagaaagag aaaaaggaaaaattaccaaaagaaatcgaggaagacaaattaaagagagaagaagaaaaa agagaagctgaaaagagtgaagactcctcaggcactgcaggcctctcaggcttacaccgc acatacagccaggactgcagctttaagaacagcatgtaccatgttggagattacgtctac gtggagcccgcggaggccagcctgcagccacacatagtctgtattgagagactgtgggaa gattctgctggtgaaaaatggttgtatggctgttggttttatcggccaaatgaaacattc catctggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaataaa gttcctgttagtaaaattctaggaaaatgtgtggtcatgtttgtcaaggaatactttaaa ttatgcccagaaaactttcgagatgaggatgtttttgtctgtgaatcacggtattctgcc aaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagttcagtgaggttt gtccctcgggatgtgcccttgcctgtggtccgagtggcctctgtatttgcaaatgcagat aaaggggatgatgagaagaacacagacaactcagaggatagtcgaactgaagacagtttt aacttggaaaaggagaaagaagatgtccctgtggaaatgtcaaacggtgagccaggttgc cactactttgagcagctccgttacaatgacatgtggctgaaggttggtgactgtgtcttc atcaagtcccatggcctggtgcgcccacgtgtgggcagaattgaaaaggtatgggtccga gatggagctgcatatttttacggccctatcttcattcacccagaagagacagaacatgag cccacaaaaatgttctacaaaaaagaagtgtttctgagtaatctggaagaaacctgcccc atgacatgtattctgggaaagtgcgctgtgttgtcattcaaggacttcctctcctgcaga ccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaacgagagtgac aagcagatgaagaaattcaaaggactgaagaggttttcgctgtctgctaaagtggtagat gatgaaatttattacttcagaaaaccaatagttcctcagaaggagccctcacctctgttg gaaaagaagatccagttgctagaagctaaatttgctgagttagaaggtggagatgatgat attgaagagatgggggaagaagatagtgaggtcattgaacctccttctctgcctcagctt cagaccccactggccagtgagctggatctcatgccctacacacccccacagtctacccca aagtctgccaaaggcagtgcaaaaaaggaaggctccaaacggaaaatcaacatgagtggc tacatcctgttcagcagtgagatgagagctgtgattaaggcccagcatccagactactct tttggggagctcagccgactggtggggacagaatggagaaaccttgagacagccaagaaa gcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagcagca cagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatgggg gtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgcaggc atgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggccttgtt agcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccgcca ggtgtgcccggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcccct atggtagggactccagcgccaggcggaagtccgtacggacagcaggtgggagttttgggg cctccagggcagcaggcaccacctccgtatcctggcccacatccagccggcccccctgtc atacagcagccaacaacgcccatgtttgtggctcccccaccgaagacacaacggcttctc cactcagaggcctacctgaaatacattgaaggactcagtgctgagtccaacagcattagc aagtgggaccaaaccctggcagctcgaagacgcgatgtccatttgtcaaaagaacaggag agccgcctgccctctcactggctgaaaagtaaaggggcccataccaccatggcagatgcc ctctggcgccttcgggatttgatgctccgagataccctcaacattcgccaagcatacaat ctagaaaatctttaa

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