Prionailurus viverrinus (fishing cat): 125158941
Help
Entry
125158941 CDS
T09889
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04136
Autophagy - other
pviv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125158941 (ATG4B)
04136 Autophagy - other
125158941 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pviv01002
]
125158941 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125158941 (ATG4B)
03029 Mitochondrial biogenesis [BR:
pviv03029
]
125158941 (ATG4B)
Peptidases and inhibitors [BR:
pviv01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
125158941 (ATG4B)
Membrane trafficking [BR:
pviv04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
125158941 (ATG4B)
Mitochondrial biogenesis [BR:
pviv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125158941 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
125158941
NCBI-ProteinID:
XP_047702573
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MAARARPPGRPAPRPGLGVPGFPSTRRGAARGSRRRGWAGAPRAGGPVRQHGAPAGPYGK
MAAPAARAHGGLTRPPTPGSRRPPASASASPTGRCRGPRSERRRPPGSRARGPSPRLWAP
PYAKMADVQFHPHFRPRPLPLGPDWPRQRPVASRCGTVGATPLSVGGRRGKMDAATLTYD
TLRFAEFEDFPETSEPVWILGRKYSISTGISHEKDEILSDVASRLWFTYRKNFPAIGGTG
PTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDGYFSVLNAFIDRKDSYYSI
HQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMEDIRRLCRG
GLPCAGAAALPADPGRHCNGFPAGAEVSNRLAPWRPLVLLIPLRLGLTDINEAYVETLKH
CFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEFADSCFIPDESFHCQHPP
SRMGVRELDPSIAVGFFCQTEEDFDDWCQRVRKLSLLGGALPMFELVEQQPSHLACPDVL
NLSLDSSDVERLERFFDSEDEDFEILSL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcgcccggccgcccggccgcccggcccccaggccgggcctcggcgtgcca
gggttccccagcaccaggcggggcgcagcccgaggctccaggcgtcgagggtgggcgggg
gcgccccgggccggtggccccgtacggcagcatggcgcgccggccggtccgtacggcaag
atggccgcgccggcggcccgggcgcacggcgggctgacgcgcccccccaccccggggtcc
cgccgcccgcccgcgtctgcttccgccagcccaacgggtcgctgccgaggtccccggagc
gaacggcgcaggccgccagggagccgagcgcgcgggcccagccctcggctttgggccccg
ccgtacgccaagatggcggacgtgcaattccaccctcacttccggccccgcccgctcccg
ctaggcccggattggccccggcagcggcccgtcgcgtcgcgctgcggaaccgtcggagcg
acgccgctctcagtcggcggccggagagggaagatggacgcagctactctgacctacgac
actcttcgatttgccgaatttgaagatttcccggagacctcagagcctgtgtggatactg
ggtagaaaatacagcatttccacaggtatcagccatgaaaaggatgagatcttgtccgac
gtggcgtccagactttggtttacatacaggaaaaacttcccagccattggggggaccggc
cccacctcggacacaggctggggctgtatgctgcggtgtggacagatgatctttgcccag
gccctggtgtgccggcatttaggccgagattggcggtggacgcagcggaagaggcagccg
gacggctacttcagcgtgctcaacgcgttcatcgacagaaaggacagttactactccatt
caccagatagcacaaatgggagtcggcgagggcaagtccatcggccagtggtacgggccc
aacacggtcgcccaggtgctcaagaagcttgctgtcttcgacacgtggagcgccttggca
gtccacgtagcgatggacaacacggtggtgatggaggacatcagaaggttgtgcaggggc
ggtcttccgtgcgcgggggccgccgcgcttcctgcggatcccggccggcactgtaacggc
ttccccgcgggagccgaggtcagcaacaggctggcaccgtggagacccctggtgcttctc
atccccctgcgcctggggctcacggacatcaacgaggcctacgtggagactctgaagcac
tgcttcatgatgccccagtccctgggcgtgatcggaggcaagcccaacagcgcccattac
ttcatcggctacgtcggcgaggagctcatctacctggacccgcacacgacgcagcccgcg
gtggagtttgcggacagctgcttcatcccggacgagagcttccactgccagcaccctccg
agcaggatgggcgtcagggagctcgacccgtccattgccgtggggtttttctgtcagacc
gaggaggactttgacgactggtgccagcgcgtcagaaagctgtcgctgctcgggggcgcc
ctgcccatgttcgagcttgtggaacagcagccttcccacctggcctgccccgacgtcctg
aacctgtccttagattcttctgacgtagagcgactggaaagattctttgactcagaagat
gaagactttgaaatcctgtctctttga
DBGET
integrated database retrieval system
