Prionailurus viverrinus (fishing cat): 125159122
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Entry
125159122 CDS
T09889
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03082
ATP-dependent chromatin remodeling
pviv04714
Thermogenesis
pviv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125159122 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125159122 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125159122 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125159122 (SMARCD3)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125159122 (SMARCD3)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125159122 (SMARCD3)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125159122 (SMARCD3)
PBAF complex
125159122 (SMARCD3)
GBAF(ncBAF) complex
125159122 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125159122
NCBI-ProteinID:
XP_047703006
LinkDB
All DBs
Position
A2:complement(163856543..163886844)
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYI
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVV
RTT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccggccagagccag
gcccagagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggatccgggagctggtccccgagtcccag
gcttatatggacctcctggcatttgagaggaaactagatcaaaccatcatgcggaagcgg
gtggacatccaagaggctctgaagaggccgatgaagcaaaagcggaagctgcgtctttat
atctccaatacgtttaaccctgcgaagcccgatgctgaagattccgatggcagcatcgcc
tcctgggagctgcgggtggaggggaagctcctggatgaccccagcaagcagaagcggaag
ttctcttccttcttcaagagtttggtcattgagctggacaaagacctttatggccctgac
aaccacctagttgagtggcaccgcacacccacgacccaggagacggacggcttccaggtg
aagaggccgggggacctgagcgtacgatgcacgctgcttctcatgctggactaccagcct
ccccaattcaaactggatccccgcttggcccggctgctggggttgcacacacagagccgc
tccgccatcgtgcaggccctgtggcagtatgtgaaaaccaacaggctgcaggactcacat
gacaaggaatacatcaacggggacaaatatttccagcagatttttgattgcccccggctg
aagttttctgagattccccagcgcctcacagctctgctgttgccccctgacccaattgtc
atcaaccacgtcatcagcgtggacccgtcggaccagaagaagacggcgtgctatgacatt
gatgtggaggtggaggagcccctgaagggacagatgagcagcttccttctgtccacggcc
aaccagcaggagatcagcgctctggacagtaagatccatgagacgattgagtccataaac
cagctcaagatccagagggacttcatgctaagcttctccagagaccccaaaggctacatc
caagacctgctccgctcccagagccgggacctcaaggtgatgacggacgtggcaggcaac
cctgaggaggagcgccgggctgagttttaccaccagccctggtcccaggaagccgtcagc
cgctatttctactgcaagatccagcagcgccggcaggagctggagcagtcgctggtcgtg
cgcaccacctag
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