Prionailurus viverrinus (fishing cat): 125160435
Help
Entry
125160435 CDS
T09889
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125160435 (PDZRN3)
Enzymes [BR:
pviv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125160435 (PDZRN3)
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
125160435 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
JmjN
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
125160435
NCBI-ProteinID:
XP_047705335
LinkDB
All DBs
Position
A2:complement(39919862..40160574)
Genome browser
AA seq
1063 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNSALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIGSIHQDMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEEDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDHLHMDMLEEQHQQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNVDDATASSTPL
AGQRKLTCSQDTLGSGDLPFSNESFLSADCADTDYLGIPVDECERFRELLELKCQAKNSN
PYSLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGSSEGAVGTTEAYGPSPKNLLAITEDPEVGSASYSPPPPQELGTSQAPESRERRPS
DDSGSPSPGPKLAGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLV
SMCKDLNSAGQAEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDA
VSELKLGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgttgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgaggctgcggccgggtggtcaagctgcagcagctgccagag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgccagggccctgcgggcgcataacagcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgccggcaagcgcgagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgcactgcgctaccaaaagaagttc
acggagtacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggagaagaaaccaaaagtctgactcttgtcctacatcgagactctggctccctggga
ttcaatattatcggtggccggccttgtgtggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacggccaaagagcccattgtggtacaggtgttgaggagaacccca
cggaccaaaatgttcacgcctccatccgagtcgcagctggtggacacaggaactcagacc
gacatcaccttcgagcacatcatggctctcacgaagatgtcctctcccaccccacctgtg
ttggatccctatctcctgccagaggagcatccctcagcccatgagtactatgaccccaat
gactacattggaagcatccatcaggacatggacagggaggagctggagttggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcacagtatgctaccggacagac
gatgaagaggacattgggatttatataagtgagatcgaccctaacagtatcgcggccaag
gatgggcgcatccgagaaggagatcgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaacaagaacttttctttgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgacagaaacgactttctg
gaccacctgcacatggacatgcttgaggagcaacaccagcaggccatgcagttcaccgcc
agcatgctgcagcagaagaagcatgaggaagacgggggaaccacagacaccgccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggacggacagacgagagcacacgcaac
gacgagagctcggagcaggagaacaacgtcgacgatgccaccgcgtcatccaccccgctg
gccgggcagaggaagctcacttgcagccaggacaccctgggcagcggcgacctgccgttt
agcaatgagtccttcctgtctgccgactgcgccgacaccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgggagctcctggagctcaagtgccaggccaagaacagcaac
ccctacagcctgtactacgccagtagccccctggacgccagcaagagcgaccccgagagc
gtggacaaagagctggagctgctgaacgaggagctgcgcagcatcgagctggaatgcctg
agcatcgtgcgcgcgcacaagatgcagcagctccgggagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtccgcaggcacgagctg
tcggacatcaccgagctcccggagaaatccgacaaagacagctcgagcgcctacaacacg
ggggagagctgccggagcaccccgctcaccttggaaatgtcccccgacaactccttgagg
agagtggcagagggcagcagcgagggggccgtggggaccacagaagcttacgggccgtcc
ccaaagaacctgctggccatcaccgaagatcccgaggtgggcagcgccagctacagcccc
cctcctcctcaagagctggggaccagccaggcccccgagagcagggagcggaggcccagc
gacgacagcgggagtcccagccccggcccgaagctggccggctcgtacctgtcccccttc
ccccactcgccctacaaacacgcccacatcccggcgcacgcgcagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatgagcctggtg
agcatgtgcaaggacctgaactcggccggccaggcggaagccaggatggagtggaaagtg
aaggtccgcagcgatggcacgcgctacatcaccaagcggccggtgcgggaccgcctgctg
cgggagcgcgctctcaagatccgcgaggagcgcagcggcatgaccaccgacgacgacgcg
gtgagcgagctcaagctggggcgctactggagcaaagaggagaggaagcaacacgtggtg
aaggccaaggagcagaggcgcaggcgcgagttcatgatgcagagcaggctggattgcctg
aaggagcagcaagcggccgacgacaggaaggagatgaacatccttgaactgagccacaaa
aagatgatgaagaagaggaataaaaagatatttgataattggatgacaatccaggaactc
ttaacccacggcacaaaatcaccagatggcacgagagtatacaattccttcttatccgtg
actactgtataa
DBGET
integrated database retrieval system
