Prionailurus viverrinus (fishing cat): 125160792
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Entry
125160792 CDS
T09889
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03440
Homologous recombination
pviv03450
Non-homologous end-joining
pviv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125160792 (RAD50)
03450 Non-homologous end-joining
125160792 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125160792 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pviv03032
]
125160792 (RAD50)
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125160792 (RAD50)
DNA replication proteins [BR:
pviv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125160792 (RAD50)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125160792 (RAD50)
BRCA1-C complex
125160792 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
125160792 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
125160792
NCBI-ProteinID:
XP_047706105
LinkDB
All DBs
Position
A1:110004554..110090994
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VRSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRDLEKLNKESRLLNQEKSELLIEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTELELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKTNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtactaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacgctgcggcaggtacgtcagacacaaggt
cagaaggtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcagatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgacctggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttattgaacagggtcgtctacagctacaagcagatcgccat
caagaacacatccgagctagagattcattaattcagtctttagcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagagacaagagaaggaaacagaaattgccaaccaaatgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagccttcaaagtgagaaagcagacctagaccggaccctgcgtaaa
ttggaccaagagatggaacagataaaccatcatacgacaacacgtacccagatggagatg
ctgaccaaagacaaatctgacaaagatgaacaaatcagaaaaataaaatctcgacacagt
gatgaattaacttcattgttagggtattttcccaacaaaaagcagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatttaaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacggcagtttactcccagttcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttacagtctaagctgcggcttgctccagataaactcaagtcaacagaattggaactaaag
aaaaaagaaaaacggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagac
atacagcgcttaaagaatgacatagaagaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggaaagattccagatg
gaacttaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttgggtagaactgtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacttaaagagtacaacaaatgaactgaagtcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacattggag
aagttccagcaggaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagca
caggataaaacgaatgatatcaaagagaaagttaaaaatattcatggttatatgaaggac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtgatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagag
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaagat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggtcttacaaatgaaaaatgaacatcagaaattg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattatacattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgacgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacagaaggtattagcctcactcatcattcgtctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccctggatgagccaacaacaaatcttgacagagaa
aatattgaatctcttgcacatgctctcgttgagataatcaagagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcacgatgaggattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
acatgtagtgttagctctctaggttcttatgtgcattaa
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integrated database retrieval system
