Prionailurus viverrinus (fishing cat): 125161191
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Entry
125161191 CDS
T09889
Symbol
HMG20B
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125161191 (HMG20B)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
125161191 (HMG20B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
MlaC
DASH_Duo1
T6SS_VgrG3-like_C
Motif
Other DBs
NCBI-GeneID:
125161191
NCBI-ProteinID:
XP_047706804
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All DBs
Position
A2:1644273..1649870
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AA seq
317 aa
AA seq
DB search
MSHGSKQPGAAAAPAGGKAPGQHGGFVVAVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK
KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYL
DEAEREKQQYMKELRAYQQSEAYKMCTEKLQEKKIKKEDSGSGLMNTLLNGHKGGDCDGF
STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL
EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK
LIVRIKEILAQVASEHL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacggctccaagcagcccggcgcggccgccgcgccggcgggcggcaaggctccg
ggacagcacgggggcttcgtggtggctgtcaagcaagagcgcggcgagggcccccgggcc
ggcgagaaggggtcccacgaagaggagccggtgaagaagcgcgggtggcccaagggcaag
aagcgaaagaagatactgccgaatgggcccaaggcaccagtcaccggctacgtgcgcttc
ctgaacgagcggcgcgagcagatccgcacccgccacccggatctgccctttcccgagatc
accaagatgctgggtgccgagtggagcaagctgcagcctgcagagaagcagcggtacctg
gatgaggccgagcgggagaagcagcagtacatgaaggagctgcgcgcctaccagcagtca
gaagcctacaagatgtgcacggagaagcttcaggaaaagaagatcaagaaagaagactcg
ggctctgggctcatgaataccctcttgaacggacacaagggtggggactgtgatggcttc
tccaccttcgacgtccccatcttcactgaagagttcttggaccaaaacaaagcgcgggag
gcagagctgcggcgcctgcgcaagatgaacgtggccttcgaggagcagaacgccgtgctg
cagaggcacacgcagagcatgagcagcgcgcgcgagcgcctggagcaagagctggcgctg
gaggagcggcggacgctggcgctgcagcagcagctccaggccgtgcgccaggcgctcacc
gccagcttcgcctcgctgcctgtgccgggcacgggcgagacgcccactctcggcaccctg
gacttctacatggctcggctgcacggcgccatcgagcgcgaccccgcccagcacgagaag
ctaatcgtccgcatcaaggagatcctggcccaggtcgccagcgagcacctatga
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