Prionailurus viverrinus (fishing cat): 125161301
Help
Entry
125161301 CDS
T09889
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125161301 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pviv03009
]
125161301 (TCOF1)
Ribosome biogenesis [BR:
pviv03009
]
Eukaryotic type
90S particles
Other 90S particles
125161301 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
125161301
NCBI-ProteinID:
XP_047707007
LinkDB
All DBs
Position
A1:complement(197528701..197566801)
Genome browser
AA seq
1505 aa
AA seq
DB search
MAEARKRRELLPLIYQHLLQAGYVRAAREVKEQSGQKSFLAQPVTLLDIYTHWQQTSEVG
QKRKAEEDAALQAKKTRVSDPISSSESSEEEEEAEAETAKATPRLAPTNSSVPGAVVPSG
TKEKARAKTKKAGKVVNSTPHPAAGKAVAHLLSGRSPKKSAGPSANTILASETEEEGSVQ
ALRTTAKPGMASASQADSSSEETSTSSDETYVEVKPSVKPPQVKTSPAPAKDSLGRGAAP
TPGKAGDVTPQVRGGALTLASKAKKPEEDSESSEESSESEEGAPLEPPHQAKASEKIVQA
RAASGPVKGTPGKGATPAPPGRTGPAAARAKSGKPEEDSESSSEEESDSEEEPPAAKTPL
QVKPSGKTPQVKAAAASAKESPRKGAPPVPPGKAGPTAAQAQVGKGKGKGEEDPESSTEE
SDSEGEAPAAVPLATSPVQAKPLGQNSQVRAASGPVKGPPQKAGPAATQAGKQEEDSGSS
SEEESDSEGEAPAQVRLLPAKSSGKIIQVTAASRPATGPPQKAGPAATQGKAEKCKDESE
SSEEESDSEEEAPAAVAPAQAKPAMKTPQTQAPPKRGTPVTPAPAKVPPVRVGTPAPWKA
GAASSPACASSPALARGAQRPEASSSSEESESEEETTPAPPAGQAKSAGKSVPVKAASAP
TKGSSGQGAVPVPAGKAGPARAPAKAEVQEDSESSEEESDSEEVTAAPAQVKTSAKTPQT
KANPASTRTASAKGAASAPGKMATAAAQAKQESPAKVKPTARTPQNNAVSVRGQGSVAAL
GKAVATAAQAQPGPVGGPQEGSESSEEESDSDGGAPAQAKPSGKTPQVRTASAPGKGFAR
KGAAAVSPGKSGAVATQARKPEEDSESSSEEESDSEEEEAVAAPAQVKPAVNHPQSKASL
TKGVAGTPKSTKAPPARVDTPAPQKPRPMTPAKKESDSKTARSKTLAPARPEKNARGSSE
SSGEELPASQVIKPPLIFVDPNRSPAGPAATATQAPAANTPRKARASESTARSSSSESED
EDVIPATQCSIPATRTNSTTLMAHPRPAVRASSSEASGRVSEGKKQEAPVAQVTKRNPAH
LPLTQAALKVLAQKASEAQPPAARTPSSSGVDSALGTLPVMSPQRAPVQAKVTNKFRKPE
VPVVQQATATPAGRPRAKASETSNDSEDSSGSSSGSEEDADGPQMVPSAHRLVGPAPSTT
ETLVEETTAESSEDEVVAPSQSLLSGYVTPGPTLANSQASKATPRTDLDPSASSTPATKD
APDGKQEVEPQQVAGTISPKTGRRQAGPTPQKPRKPKKEAGSPQASTLALQGDISRRLLN
EPWPLNEAQLQASVVKVLTELLEQERKKAADAAKESSRKARGGRKRKLSEDQTAARAPKS
KKKKQPVAGGSGEGAVSPEKASGTPKGKSKRAGASGDIKEKKEKESPGSQGAKERPEGEP
GTLKVEGGDQGNPKSKKEKKKSDKKKKDKEKKEKKKKAKKASTKDPDSPFQKKKKKKKKT
AEQTV
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggccaggaagcggcgggagcttcttcccctgatctaccagcatctgctacag
gcgggctacgtgcgcgcggcgcgggaagtgaaggagcagagtggccagaaaagtttcctg
gctcagcctgtaacccttctggacatctatactcactggcaacagacgtcagaggttggc
cagaagcggaaggcagaggaagatgcagcgctgcaggctaagaagacccgtgtgtccgac
cccattagcagctcagagagctcagaagaggaggaggaggcagaggccgagaccgccaaa
gccaccccaagactggcgcccaccaactcctcggttccgggggcagttgtgccatcaggc
acgaaagaaaaagccagggcaaagaccaagaaggccggcaaggtggtgaactccacaccg
catcctgccgctgggaaggcggtggcccaccttctgtctgggaggtcacctaagaagtca
gcagggccttcagcgaataccatcctggcctcagaaactgaggaggagggcagtgtccag
gccctcagaaccacggccaagcctggaatggcatcggccagccaggctgacagctccagc
gaggagacctccacctcgagcgatgagacatatgtggaggtgaaaccttcagtaaaacca
ccccaggtcaaaacctcaccagcccctgccaaggactccctagggagaggggcagcccca
acccctgggaaggcaggggatgtgacaccccaagtcagaggaggtgccctgaccctagcc
agcaaggccaagaagccagaagaggactcggagagcagtgaggagtcgtctgagagtgag
gagggggcccctttggagccgccccaccaggcgaaggcctcggagaaaattgtccaggcc
agggctgcctcgggccccgttaaggggacccctgggaaaggggccaccccagcaccccct
gggaggacagggcctgcagctgcccgggccaagtcagggaagccagaggaggattcagag
agcagcagtgaggaggagtctgacagcgaggaggagccgccagctgccaagacaccactt
caggtgaagccttcagggaagaccccccaggtcaaagctgccgcagcctctgccaaggag
tcccctaggaaaggggcccctccagtgccccctggcaaggcagggcctacagctgcccag
gctcaggtggggaaggggaaggggaagggggaagaagacccagagagcagcactgaggag
tccgacagcgagggggaggcgccagcagccgtgcccctagccacgagccctgttcaggca
aagcccttggggcaaaactcccaggtcagagcagcctccggtcccgtgaaggggccccct
cagaaggcagggcctgcagccacccaagcagggaagcaggaggaggactcagggagcagc
agcgaggaggagtcagacagcgagggggaggcgccggcccaggtgaggctcctgcctgca
aagtcctcggggaagatcatccaggtcacagctgcctcacgtcctgccacggggccccct
cagaaggcagggcctgcagccacccagggcaaggccgaaaagtgcaaggacgagtcagag
agcagtgaggaggagtcagacagtgaagaggaggcgcctgcagctgtggctccagcccag
gcaaaaccagctatgaaaacaccccagacccaggcccctccaaagaggggcacccccgtt
acccctgcacctgccaaggttcccccggtgcgagtgggcacgccagccccttggaaggca
ggagccgcatcctctccagcctgcgcctcatccccagctctggccaggggcgcccagagg
cccgaggcctcttcaagcagcgaggagtcggagagtgaagaggagaccactcctgcccca
ccagcaggacaggcaaagtctgcgggtaaaagcgtcccggtgaaagctgcctctgcaccc
accaaggggtcctcgggccaaggggctgtcccagtacccgctgggaaggcagggcctgca
agggccccggctaaagctgaggttcaggaagattcagagagcagtgaggaggaatcagac
agtgaggaggtgactgcagccccagcccaggtgaagacctcagcgaaaaccccacagacc
aaagccaacccagcttccaccagaacagcttcagccaaaggggcagcgtctgctcccgga
aaaatggccactgcagcagctcaagccaaacaggagtccccggccaaggtaaagccaaca
gcaagaaccccccagaacaatgctgtctcagtgaggggccaggggtctgtggcagctctg
gggaaagcagtggccacggcagcccaggcccagccggggccagtcgggggcccacaggag
ggctcggagagcagcgaagaggagtcagacagtgacgggggagcccccgctcaggcgaag
ccctctgggaagaccccccaggtcagaactgcctcagcccctggcaaggggttcgccagg
aaaggggctgcagcagtttcccccgggaagtcaggagccgtggccacccaggccaggaag
ccagaggaggactcggagagcagcagtgaggaggagtctgacagtgaggaggaggaggcg
gtggcggcaccagcccaggtgaaacctgctgtaaaccacccccagagcaaggcctccctg
acgaaaggtgtcgcaggcactcctaaatctaccaaggctcccccagcacgagtggacaca
ccggccccacagaagcctaggccaatgactcctgccaagaaggagagtgactccaaaact
gccagaagcaagaccctggccccagcacgtccagagaagaatgccagagggtcctcggag
agcagtggcgaggagctcccggccagccaggtgattaaaccccctctgatttttgtcgac
cctaatcgtagtccagctggcccagctgctaccgccacacaagccccagctgcaaacacc
ccgaggaaggcccgggcctcggagagcacagccaggagctcctcctctgagagcgaggat
gaggatgtgatccctgctacgcagtgctccattcccgccactagaacaaactcgaccacg
ctcatggcccacccaaggcccgctgtcagagccagcagcagtgaggcgtccggtcgggtg
tcggaaggcaagaaacaggaggcaccggtcgctcaggtgacaaagaggaaccctgctcac
ctcccgctgactcaggccgccctgaaggtccttgcccagaaagccagtgaggcccagcct
cctgctgccaggaccccgtcttcaagtggggttgacagtgctctgggaacactccctgtg
atgagtccccaaagagcccctgtgcaggccaaagtgaccaacaagttcaggaaacctgag
gttcctgtggtccagcaggccacggccacccctgcaggacgccccagagccaaggcctct
gagacctccaacgacagtgaggacagcagcggcagctcttcagggagtgaggaggatgct
gatgggccccagatggtcccctcggcccacagactggtaggtccggccccctccacaacg
gagaccttggtggaggagaccacagcagagtccagtgaggacgaggtggtggcaccctct
cagtctctcctctcaggttatgtgacccctgggccaactctggccaattcccaggcttca
aaggccactcccaggacagatctcgacccctcggcttcctctactcccgccaccaaagat
gccccagacggcaagcaggaagtggagccccaacaagtagcaggcaccatatcccctaaa
acaggcagaagacaggctggtcccacgcctcagaagccccggaagcccaagaaggaggct
gggagcccccaagcgtccacgctggcgctgcagggcgacatcagccggcgcctcctgaac
gagccctggcccctgaacgaggcccaactccaggcctcggtggtcaaggtcctgacggag
ctgctggagcaggaaaggaagaaggccgcggatgccgccaaggagagcagcaggaaggcc
cgggggggccgcaagcggaagctgtcggaggaccagacggctgccagggcccccaagagc
aagaagaagaagcagccggtggctgggggaagcggggagggtgcagtctcgccagaaaag
gcctccgggactcctaaggggaaatccaagagagccggagcaagtggtgacatcaaggag
aagaaggaaaaagagtctcctggctctcagggggccaaggagaggccagaaggggagccg
gggacgctgaaggtggagggtggagaccagggcaaccccaagagcaagaaagagaagaag
aaatccgacaagaaaaaaaaagacaaggaaaaaaaggaaaagaagaagaaagcaaaaaag
gcctcaaccaaagaccctgactcaccattccagaagaaaaagaagaaaaagaagaagaca
gcggagcagactgtgtga
DBGET
integrated database retrieval system