Prionailurus viverrinus (fishing cat): 125161580
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Entry
125161580 CDS
T09889
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv01524
Platinum drug resistance
pviv03430
Mismatch repair
pviv05200
Pathways in cancer
pviv05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125161580 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125161580 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
125161580 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
125161580 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125161580 (MSH6)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125161580 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
125161580
NCBI-ProteinID:
XP_047707221
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All DBs
Position
A3:67499897..67521508
Genome browser
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNANKASVRASGEGGGAAAATRASASPGGDAAWSEAEPGPLAG
SASPPEARNINGGLRKSAAPAVPPSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRADE
ALNKDKIERLELAVCDEPSEPEEEEEMEVGATYSSDKSEEDKEIESEEEVPPKVQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKRK
KMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSESQAHTGGGCEDSSR
PTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNF
DLVIFYKVGKFYELYHMDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVA
RVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLS
LKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNL
STETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEAYFKEKLNEDSGVMLPQVLKG
MTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATR
PGAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAP
LCSPYAINDRLDAIEDLMAVPDKISDVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR
AIMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGR
FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR
IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA
EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLTNYSRGGDGPMCRPVILF
PEEDTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEESGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQTGCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKA
REFEKMTQSLRLFREVCLASERSTIDAEAVPKLLTLIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgct
aacaaggcctcggtcagggcctcaggtgaaggcggtggtgccgccgctgctacccgggcc
tccgcttctcccggtggggatgcggcctggagcgaggccgagcctgggcccctagcgggc
tctgcgtcgccacccgaggcgaggaacatcaatggagggctgcggaagtcggccgcgccc
gcggtcccccccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcctggtttataaccacccttttgatggaacattcatccgc
gagaaagggaagtctgtccgagttcatgtacagttttttgatgacagcccaacaaggggc
tgggttagcagaaggctattaaagccatatacaggttcaaaatcgaaagaagcacaaaaa
ggaggtcatttttatagttcaaagcctgaaatactcagagcaatgcaacgtgcagatgaa
gccttgaataaagacaagatcgagaggcttgaattggcagtgtgtgatgagccctcagaa
ccagaggaagaagaagagatggaggtaggtgcaacttactcatcagataagagtgaagaa
gataaggaaattgaaagtgaagaagaagtgccacctaaggtgcaaggatctaggcgaagt
agccgccagataaaaaaacgaagggtcatatcagactctgagagtgatgttggtggctct
gatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagtgga
gtgggggacagtgacagtgaaggcttggacagccctgtcaaagttgcttcaaaacggaag
aaaatggtgtctggaaatggcgctctcaaaaggaaaagttcaaggaaggaaatgcccttg
gccaccaaacgatcaactggcatttcatcagaaaccaagagcactctgagtgctttctct
gcccctcagaattctgaatctcaagcccacactggtggaggatgtgaggatagtagtcgc
cccactttctggtatcatgaaactttagagtggcttaaggaggaaaagagacgagatctc
cacaggaggcgacctgatcaccccgattttgatgcatccacactctatgtgcctgaggat
ttccttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaacttt
gatcttgttattttttataaggtggggaagttttatgagttgtaccacatggatgctctt
gttggagtcaatgaactcgggctggtattcatgaaaggcaactgggctcattctggtttc
cctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagtagca
cgagtggaacagactgagaccccggaaatgatggaggcacgatgccggaagatggcacat
atatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggtaca
cagacctacagtgtactggaaggtgacccctctgagaactacagtaagtatcttcttagc
ctcaaagaaaaagaggaggattcctctggccacactcgagtgtatggagtatgctttgtt
gatacctcactgggaaagtttttcataggtcagtttccagatgatcgccactgttctaga
tttaggactctagtggcacactaccctccagtacaagtcttgtttgagaaaggaaatctc
tcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggtctg
ataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaagca
tattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaaggt
atgacctcagagtctgattctcttgggttaacaccaggagagaagagtgaattggccctc
tctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctttta
tcaatggctaattttgaagaatacattcccttggattctgacagggttagtgctacaaga
cctggtgctgtttttgcaaaagccaatcaacggatggtgctagatgctgtgacattaagc
aacttggagattttcctgaatggaacaaatggttctactgaagggaccctgctagaaaag
attgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgcccca
ctctgtagcccttatgctatcaatgatcgtttagatgctatagaagacctcatggctgtg
cctgacaaaatctctgatgttgcagaccttctaaagaagattccagaccttgagaggctg
ctgagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagcagg
gctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttctgct
ctagaaggattcaaagtaatatgtaaaattatagagactatggaagaagttgctgacaac
tttaagtctaaaatccttaagcaagtcattactttgcagacaaaaaatcctgagggccgt
tttcctgatttgactatagaactgaaccgatgggatacagcctttgaccatgaaaaggct
cgaaggactggactaattactcccaaagcaggatttgaccctgattatgaccaagctctt
gctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagtcga
attggctgtaggaccattgtctactgggggattggcaggaaccgttaccagttggaaatt
ccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatccaccaagaag
ggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctgataaacgct
gaagagcggagagacgtatcattgaaagactgcatgcggcgactcttctataactttgat
aaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattggatgtcttactg
tgcctgactaactacagtcgagggggtgatggccctatgtgtcgtccagtaattctgttt
ccagaagaagacacaccccccttcttggaccttagaggatcacgtcatccttgcattacg
aagactttttttggagatgactttattcctaatgacattctaataggctgtgaggaagag
gaggaggaaagtggcaaagcttattgtgtgcttgttactggacctaatatggggggcaag
tcgacactcatgagacaggctggcctgttagctgtaatggcccagacgggttgttacata
cctgctgaagtatgcaggctcacacctattgatagagtatttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagtatc
cttacacacgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacataaag
tgtcgtacattgttttctacccattaccattcattagtggaagattattctcaaaacgtt
gcagtgcgcctgggacacatggcatgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctatataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaagcttgctaatcttccagaggagattattcaaaagggacatagaaaagca
agagaatttgagaagatgacccaatcactgcgattatttcgggaagtttgcctggctagt
gaaaggtcgactatagatgctgaagctgtccctaagttgctgactttgattaaggaatta
tag
DBGET
integrated database retrieval system
