Prionailurus viverrinus (fishing cat): 125161614
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Entry
125161614 CDS
T09889
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125161614 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pviv04812
]
125161614 (SPTBN1)
Cytoskeleton proteins [BR:
pviv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125161614 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
125161614 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
125161614
NCBI-ProteinID:
XP_047707301
LinkDB
All DBs
Position
A3:73533286..73732680
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIL
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDTLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHNMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRRRLADLKELWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEMESQQQWDTSKGEQVSQNGLPTEQGSPRMAEAVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKPALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSIFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgagaacagctccgcaaggctcttt
gagcggtcccgaatcaaggctctggcagatgagcgtgaagctgtgcagaagaagaccttc
accaagtgggtcaattcccacctcgcccgggtgtcctgccggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctactggaagttctctctggagagaggctg
cctaaacccaccaagggacgaatgcgtatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccatgacatcgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagaaactgaagacaacaaagagaagaaatctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctgggtacccgaacgtcaacattcacaatttcaccacc
agctggagggacggcatggccttcaatgccctgatacacaaacaccggcctgacctgata
gatttcgacaaactaaagaaatccaatgcacactacaatctgcagaatgcgtttaatctg
gcagagcagcaccttggcctcactaaactgttggatccggaagatatcagtgtggaccac
cctgatgagaagtccattatcacttatgtggtgacttattaccactacttctctaagatg
aaggctttggctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgagtcacttgcctctgatcttctggagtggattgaacaa
accatcattatattgaacaatcgcaaatttgccaattctctggttggggttcaacaacag
cttcaggcttttaacacttaccgcactgtggagaaaccacccaagtttactgagaagggg
aacttggaagtgctgctttttactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccccgggagggcaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacacgagcgagaactggctctgcggaacgagctcatcagacaggagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacctggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggttttgaccttcctgctgttgaggccgcc
acaaaaaagcacgaggccattgagacagacatcgccgcatacgaggaacgtgtgcaggcg
gtggtagcagtggccagggagcttgaggcggagaactaccacgacatcaagcgcatcaca
gcaaggaaagacaatgtcatccggctctgggagtacctgctggaactgctcagggcccgg
aggcagcgtcttgagatgaacctggggctgcaaaagatattccaggaaatgctctacatt
atggactggatggacgaaatgaaggtgctattactgtctcaagactatggcaagcacttg
cttggtgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgagtgagaggcgtcaatgcctctgcccagaagttcgcaacagacggggaaggt
tacaagccctgtgaccctcaggtgatccgagaccgcgtggcccacatggagttctgttac
caagaactctgccagctggcagccgaacgccgggctcgactggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggagggctggatacgagagaaggagaagatc
ctgtcctccgacgattatgggaaggacctgactagcgtcatgcgcttgctcagcaagcac
cgggcattcgaggatgagatgagcggccgcagtggccatttcgagcaggccatcaaagaa
ggtgaagacatgatcgcggaggagcactttgggtcagagaagatccgagagcggatcctt
tacatccgggagcagtgggccaacctggagcagctctcggccatccggaagaagcgcctg
gaggaggcctcgctgctacaccagttccaggcagacgccgacgacattgacgcgtggatg
ctggacatcctcaagattgtctccagcaatgacgtgggccatgacgagtactccacgcag
tctctggtcaagaaacacaaggacgtggcagaggagatcgccaactataggcccaccatc
gacacgctgcacgagcaggccagcgccctcccccaggagcatgccgagtctccagatgtg
aggggccggctgtcaggcatcgaggaacggtacaaggaggtggcagagctgacgcggctg
aggaagcaggcactgcaggacaccctggccttgtacaagatgttcagtgaggctgatgcc
tgtgagctctggatcgacgagaaggagcagtggctcaacaacatgcagatcccagaaaaa
ctggaggacctggaagtcatccagcacagatttgagagccttgagcctgaaatgaacaac
caggcttcccgggtcgcagtggtgaaccagattgcacgacagctcatgcacagtggccac
ccaagtgagaaggagatcaaagcccagcaggacaaactcaacacaaggtggagtcagttc
cgagagctggtcgacaggaagaaggacgctcttctctctgccctgagcatacagaactac
caccttgagtgcaatgaaaccaaatcctggattcgagaaaagacaaaggtcatcgagtcc
acccaggacctgggcaacgacctggccggcgtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaagaggcggag
aagctcgagtccgagcaccccgaccaggctcaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagacaaccctgaaaaaccgcgaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggatctggacgacttccagtcctggctctcccgg
acccagacggccatcgcctctgaggacatgcccaacaccctgactgaggcagagaagctc
ctcacgcagcatgagaacatcaaaaacgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagaccgacgcccagtacatgtttctg
cggcagcggctgcaggccctggacaccgggtggaacgagctgcacaaaatgtgggagaac
aggcagaatctcctgtcccagtcacatgcctaccagcagttccttagggacacgaagcag
gccgaggccttccttaacaaccaggagtatgttttggctcatactgaaatgcctaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgtcgtggagacaggccggaggctggtgagcgatggaaac
atcaactcagatcgcatccaggagaaggtggactccattgatgacagacataggaagaat
cgcgaggcagccagcgagcttctgatgcgtttgaaggacaaccgggatcttcagaaattc
ctgcaagattgtcaggagttatctctttggatcaatgaaaagatgcttactgcccaggac
atgtcttacgatgaagccagaaatctgcatagtaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtaaaggaaaaactcactggtttacataac
atgtgggaagtcctcgagtccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaacttttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcagtctgatgactatggcaaagaccttaccagcgtcaacatcctgcttaaa
aagcaacagatgctggagaaccagatggaggtgcggaagaaggagatcgaggagctccag
agccaggctcaggccctgagtcaggaggggaagagcactgacgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggaactgctggagcccttgaatgaaagaaagcataat
ctgctggcctctaaagagatccatcagttcaacagggatgtggaggatgagattttgtgg
gttggagagaggatgcctttggcaacttccacagatcatggccacaacctccagactgtg
cagctgttaataaagaaaaatcagaccctccagaaagaaatccaggggcaccagcctcgc
attgatgacatctttgagaggagccaaaacattgtcactgacagcagcagcctcaacgcc
gaagccattcgacggaggctcgctgacctcaaggagctatggggtctcctcattgaggag
accgagaagcgccacaggcggcttgaggaggcgcacagggcccagcagtactacttcgat
gctgctgaggctgaggcgtggatgagcgagcaagagctgtacatgatgtctgaggagaag
gccaaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagcc
gtggaggactatgcagagaccgtgcatcagctctctaagaccagccgggccctggtggct
gacagccatccggaaagtgagcgcatcagcatgcggcagtccaaagtggacaagctgtac
gcgggtctgaaagacctggccgaagagcggaggggcaagctggacgagaggcacaggctc
ttccagctcaaccgggaggtggacgacctggagcagtggatcgctgagagggaggtggtc
gcagggtcgcatgagttggggcaggactacgagcatgtcacgatgttacaagaacgattc
cgggaatttgccagagacacagggaacattggacaggagcgtgtggacacagtcaatcac
atggcagatgagctcatcaactctggtcattcggatgccgccaccatcgccgagtggaag
gatgggctcaacgaagcctgggctgacctcctggagctcatcgacacgagaacacagatt
ctcgccgcctcttatgaactgcacaagttttaccatgatgccaaggagatctttgggcgc
atacaggacaaacacaagaaactccccgaggagcttgggagagatcagaacacagtggag
accttacagagaatgcacaccacgtttgagcatgacatccaggctctgggcactcaggtc
aggcagctgcaggaggatgcggcccgtctacaggcagcctacgcgggtgacaaggctgac
gacatccagaagcgggagaatgaggtcctggaagcctggaaggccctgctggatgcctgt
gagggccgcagggtgcggctggtggacacgggggacaagttccgcttcttcagcatggta
cgagacctcatgctgtggatggaagacgtcatccggcagattgaagcccaggagaagcca
agggatgtatcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatc
gatgctcgtaatgacagctttacaacttgcattgaacttgggaaatccctattggcgagg
aagcactatgcatctgaggagatcaaggaaaagctattgcagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccac
cagttctcacgggacgccagtgtggccgaggcctggctgctcggacaagagccataccta
tccagccgagaaataggccagagtgtggatgaggtggagaagctcatcaagcgccacgag
gcttttgaaaagtctgcagcaacctgggacgagaggttctctgccctggaaaggctgaca
acattggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccctctcccgagccgagcacgaaggcttccgaggagatggagtcccagcagcagtgggat
acctcaaaaggagagcaagtttcccagaacggtttgccgactgaacagggatctccacgg
atggcagaagcggtggacacaagcgaaatggtcaacggcgccgcagagcaaagaacaagc
tcaaaggagtctagccccatcccctcccccacgtccgaccgcaaagccaagcctgccctc
ccggcccagagtgccgccaccttgccggccagaacccaggagacgccttcggcccagatg
gaaggcttcctgaatcggaagcacgagtgggaggctcacaataagaaagcctcaagcagg
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttctacaaagatgca
aagaccgctgcctctggaattccctaccacagcgaggtccctgtgagtttgaaagaagcc
atctgtgaagtggcccttgattacaagaagaagaaacacgtgttcaagctaagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccag
gccatctcctccgccatctcctctgataaacatgaggtgtccgccagcacccagagcacg
ccagcatccagccgggcacagaccttgcccaccagcgtcgtcaccatcaccagcgagtct
agccctggcaagcgggagaaggacaaagagaaagacaaggagaagaggttcagcattttt
ggcaaaaagaagtga
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integrated database retrieval system
