Prionailurus viverrinus (fishing cat): 125161657
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Entry
125161657 CDS
T09889
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125161657 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125161657 (NELFCD)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
125161657 (NELFCD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
125161657
NCBI-ProteinID:
XP_047707417
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All DBs
Position
A3:complement(4377438..4389885)
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AA seq
601 aa
AA seq
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MRRVRARSRERMAGAAPGAIMEEDYFGSAAEWGDEADGGQQEDDYGEGEDDAEVQQECLH
KFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPV
QVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDC
LMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAK
MVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQEVQRFAQEKGHDASQITLALGTAASY
PRACQALGAMLSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGARIN
QDHKHKYIHILAYAASVVETWKKNKRVGINKDELKSTSKAVETVHNLCCNENKGASELVA
ELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQV
LQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISL
IRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFILV
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtgttcgcgcgcgctcgcgggagaggatggccggggccgcgccgggcgccatc
atggaggaggactacttcgggagcgcggccgagtggggcgacgaagcggacggtggccag
caggaggatgattatggagaaggagaagacgatgcggaggtccagcaagaatgcctacat
aaattttctacccgggattatataatggagccctccatctttaacactctgaagaggtat
tttcaggcaggagggtctccggagaatgttatccagctactgtctgagaactacactgcc
gtggcccagaccgtcaacctgctggctgagtggctcattcagacaggtgttgaaccagtg
caagttcaggaaactgtggaaaatcacttgaagagtttattgatcaaacattttgacccc
cgcaaagcagattctatttttaccgaagaaggagagaccccagcttggcttgaacaaatg
attgcacataccacgtggagagatcttttttacaaactggctgaagcccatccagactgc
ttgatgctgaacttcactgttaagctgatttcggacgcagggtaccaaggggagataacg
agcgtgtccacagcctgccagcagctggaagtgttctctagagtgctccgtacctctcta
gctacaattttggacggaggagaggaaaaccttgaaaaaaacctccctgagtttgccaag
atggtgtgtcatggggagcacacgtacctgtttgcccaggccatgatgtccgtgctggcc
caggaagagcaaggaggctccgccgtgcgcaggatcgcacaggaggtgcagcgcttcgcc
caggagaaaggtcatgatgccagtcagatcacacttgcgctgggcacagctgcctcctac
cccagggcttgtcaggctcttggggccatgttgtccaaaggagccctgaatccggccgac
atcacggtcctcttcaagatgttcacaagcatggacccgcctcctgttgaacttatccgg
gtgccggccttcctggacctgttcatgcagtcgctctttaaaccaggggcccggatcaac
caggaccacaagcacaagtacatccacatcttggcgtatgctgccagcgtggttgagacc
tggaaaaagaacaagcgcgtgggcatcaacaaagatgagctgaagtcaacgtcaaaagcc
gtggagactgttcacaacttgtgctgtaatgaaaacaaaggggcctccgagctagtggcc
gagctcagtacactttatcagtgcatcaggttcccggtggtggccatgggtgtgctcaag
tgggtggactggactgtgtcagagccgcgatacttccagctacagaccgaccacaccccg
gtacacctggccttgctggacgagatcagcacctgccaccagctcctgcacccccaggtc
ctgcagctgcttgttaagctttttgagacggagcactcccagctggacgtgatggagcag
cttgagttgaagaagaccctgttggacaggatggttcacctgctgagtcgaggttacgta
cttcctgttgtcagttacatccgaaagtgtctggagaagctggacactgacatttcactc
attcgctattttgtaactgaggtgctggacgttatcgctcccccgtacacctctgacttc
gtgcagctcttcctccccatcttggaaaacgacagcatcgcaggcaccattaaaacagag
ggcgaacatgaccccgtgacggaatttatagctcactgcaagtctaacttcatcctggtg
aactaa
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