Prionailurus viverrinus (fishing cat): 125161833
Help
Entry
125161833 CDS
T09889
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pviv03037
]
125161833 (IFT88)
Cilium and associated proteins [BR:
pviv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125161833 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_5th
TPR_21
TPR-S
ARM_TT21_N
ARM_TT21_C
RPN7
DUF6584
TPR_15
HEAT_Nup120
HAT_PRP39_C
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
125161833
NCBI-ProteinID:
XP_047707965
LinkDB
All DBs
Position
A1:1598677..1731709
Genome browser
AA seq
825 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQEAVRTSHGRRPPITAKIPSTA
VTRPVATGYGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAAVRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERILVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
LAPNLKAGFNLILSYFAVGDRDKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKRLNQLDEALD
CFLKLHAILRNSAQVLYQIANVYELMEDPNQAIEWLMQLISVVPTDSRALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPSQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRVRSGRDGGGGSRSRREGSAGSDSGQSCSASSKGERLSAKLRALPGTNEPYESS
SNKEIDASYVDPLGPQIERPKTAARKRIDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctatgacactgaggaattagagaacgacacagcttttcaggaa
gccgtgagaactagtcatggcagaagacctccaataactgctaaaataccaagcacagca
gttactagacctgtagctactggatatgggtccaagacatccctggcatcatcgatggga
agaccaatgacaggggctattcaggatggagttactaggccaatgacagcagtgagagca
gctggttttaccaaagcagctgtaagaggctctgcatttgacccccttggtcagtcaagg
ggccctgctcctcctttggaagccaaaaatgaagatagtccagaagaaaagattagacaa
ttagagaagaaagtaaatgaattggtagaagaaagctgtattgccaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaggagagaatcttggtgaga
caacgagaacaagttacaactccagaaaatatcaatttggatttaacttactcagttctt
ttcaacttggccagtcaatattcagcgaatgaaatgtatgctgaagcactaaatacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagattgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcacta
gatcaaattccaagcgtccataaagaaatgaggattaaaatcatgcagaacattggtgtt
acatttattaaaactggtcaatattcagatgccattaattcatttgagcacataatgagt
ctggcaccaaatctgaaggcaggcttcaacctgattcttagttactttgctgttggagat
cgagacaaaatgaagaaggcgttccaaaaattgattgcggttccattagaaatcgatgaa
gatgataaatatatctcaccaagtgatgatccacatactaacttagtaatcgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaacggaaagctatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcctctcagtatgtagagctagcaaatgatctggaaata
aacaaagcaattacatacttgagacaaaaggactttaaccaagctgtggagaccttaaaa
atgtttgaaaaaaaggacagtagagtgaaaagtgcagctgcaaccaacctctcatttctg
tattatttggaaaatgaatttgcacaagccagtagctatgcagatttagctgtgaactct
gatagatataatccctcagctctgactaacaaagggaatacagtttttgcaaacggtgat
tatgagaaggcagctgaattctacaaagaggctctaagaaatgattcttcttgtactgaa
gcactttataatattggccttacctataagaggctaaaccagcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaacagtgcccaagttctttaccagatagca
aatgtatatgaattaatggaagatcccaatcaagctattgaatggttaatgcaactgatc
agtgttgttccaactgattctagagctctgtctaaactaggagaattatatgatagtgaa
ggagataaatcccaagcatttcagtactactatgagtcatataggtatttcccctctaac
attgaagttattgagtggcttggagcttattacattgacacccagttttgtgaaaaagcc
attcaatactttgaaagagcttctcttatacagccttcacaagtgaaatggcagctgatg
gtggctagttgttttagaagaagtggtaactaccaaaaagcattggatacttacaaggat
attcacagaaaatttccagaaaatgttgaatgtctgcgcttcttggttcgtctctgcacg
gatattggattaaaagaagttcaagaatatgcaacaaaacttaagagattggaaaaaatg
aaagaaataagggaacagcgcgtaaggtctggcagagatggcggcgggggctcccgcagc
agaagagagggcagtgccggcagtgatagtggccagagctgtagtgccagtagtaaaggt
gaacgactaagtgccaaactcagagctttacctgggacaaatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcttatgtggatccactgggccctcaaatagaaaggcca
aaaactgcagcaagaaaaagaattgacgaggatgattttgctgatgaagagttaggagat
gatttgcttccagaataa
DBGET
integrated database retrieval system
