Prionailurus viverrinus (fishing cat): 125161926
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Entry
125161926 CDS
T09889
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125161926 (CHD6)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125161926 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
125161926
NCBI-ProteinID:
XP_047708218
LinkDB
All DBs
Position
A3:18691373..18898070
Genome browser
AA seq
2717 aa
AA seq
DB search
MIMKIQKKEKQLSGLKVLNHSPMSDASVNFDYKSPSPFGHGTDQEEKIEDVASHCLPQKD
LYAAEEEAETLFPRKMTSHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEARKAKEPKRAKEPKEPKQKDGVKKARKPREASGTKEAKEKRSGVDSAARTK
SKKASKEQGPTPVERKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYMEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTEGTSDIPERGNTDKEDNTEDKLDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVPSALTARLRRLVTVYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
SFVAMCRNVCRLPTWKDGGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLVGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDAQAPESLCCLYQTNSRLYESLTYTQMSRTSEPLENEPENLVKIESRDDHLTPPGGSLS
DMTCDNFISKVQDVISITHDESLLPESLESMMYGKKALIREPGSLQESPSTNTEPRKDAL
ALSASKDGNCRPAGHEAEIPSGPSFMSSLEAGVAQMNIKNGKHLLLSLSREGDVCSEAGQ
RPESIGQLEAKHLASPSLDQGNESGFVDMCHLSVCDSRRSLSSDQQLIDLLENKSLESKL
VLSQNHSEEEEEEEENEEENVGVTTGLRERPEVLHLAEPTANILREKSQGLPVDEVKRGS
LEAMSQHPRPQGAFPPAACQCHCKHTERWARGLENEEFEVDKSKGYTPDLYRSKTNSITV
EGEPTAPPSEPFQGKHELSKEPWKENAEGKKGFPAYPEASELKSEDMDFESKDDYDRDGN
SHAQDYPGKYSEEESKSSASGIAGDLGDDLQEARAPTIAQLLQEKTLFSFSEWPKDRVII
NRLDNICHVVLKGKWPSSQQYEPPGTLPTPVLTSSAGSRSSISEPETSEHSFSSGAALVA
QIQKESFLAPVFTKDDQKHRRPYEFEVERDAKARGLDQFSATHGHPPIVLNGWHGESAID
LSCTSEGSPGAASPFPLSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLR
RDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPSSASHPEGPVSAASA
PEPAPAAGSQAEKAIPSKSLLDWLRQQADYSLEVPGFGANFSDKPKQRRPRCKEPGKLDV
NSLSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGPRRRGRRPRSELLKTPAIVA
DSPSGMGPLFMNGLIAGMDLVGLQNMRNLPGIPLTGLVGFPAGFATMPTGEEVKSTLSML
PMMLPGMAAVPQMFGVGGLLNAPMATACTNTAPAPLSSTTKSGTAATEKTVEDKPSSHDV
KTDTLAEDKPGPGPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPA
MQQARHSEAVGLESQKRKKKKTKGDSLNPNPEPAPGSEKEPGGDQNCPEPRAPVPPERGH
VAQAREGGLKDSNSDTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaaaagaaggagaagcagttgtcaggtttaaaagttctgaatcac
tctccaatgtctgatgcctctgtcaattttgactacaaatccccctccccatttggccat
ggcactgatcaggaagagaagatcgaagatgttgccagtcactgtctgcctcagaaggac
ctgtatgctgctgaagaggaagctgagaccctttttcctaggaaaatgacgtcccataac
gggatggaggacagtggaggaggaggcaccggagtaaagaagaaaaggaagaaaaaggac
ccgggagagcaagagggggcagcgaagggaagcaaggacagggagcccaagccaaagagg
aagcgagagcctagagagccaaaggaagcccggaaggccaaggagcccaagagggccaag
gagcccaaggagcccaagcagaaggatggagtcaagaaagcacggaagccccgggaggcc
tcaggtaccaaggaggccaaagagaagaggagtggcgtggactctgcagccaggacgaag
tccaagaaagccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaag
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caggtgaagcgcagaaaatataacgaggacctggatttcaaggtggtggacgatgacggg
gagacaatcgccgttcttggagccggccggacgtccgccctctcggcttctacactggca
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagaccgtccaggaggttcaccccggagagcccccattcgacttggagctattctacgtt
aagtatagaaatttttcctacttgcattgtaaatgggccacaatggaagagctggaaaag
gatcctcgcattgcacagaagatcaagcgattcaggaataaacaagcccagatgaagcac
atttttactgagcctgatgaagacttgttcaacccagactatgtagaagttgatcgcgtc
ctggaggtagcccacaccaaagatgccgaaacaggagaggaggtgacgcattacctggtg
aagtggtgctcactgccttacgaagaaagtacgtgggaactagaggaagatgtggatcct
gcaaaagttaaagaatttgagtctcttcaagttctccctgaaattaagcatgtggagcgg
cctgcttcggactcctggcagaaactggagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aattgtattttggctgatgagatggggctggggaaaaccatccagtccatcacattcctc
tcagagatattcctccgaggaatccacggcccttttctcatcatcgccccactctccacc
atcacgaactgggagcgagagttccggacgtggacagagatgaatgccattgtgtaccat
ggcagccagatcagcagacagatgatccagcagtatgagatggtgtacagagacgcacag
ggaaaccccctttcaggagtcttcaagttccacgttgtcatcacaacgtttgagatgatc
ctggcagactgcccagagctgaaaaagattcactggagctgtgtgataattgacgaagcc
cacagactgaagaacaggaactgcaaacttctggagggtctaaagctcatggccctggaa
cacaaagtactgctcactgggacaccgttacagaactctgtggaggagctcttcagtttg
ctgaattttctggagccatcacagtttccttcagagactgctttcttggaggaatttgga
gatctgaaaactgaggaacaggtgaagaaactgcagtctatcctaaaaccaatgatgctt
cggcggctgaaagatgatgtggaaaagaaccttgctcctaaacaggagacgatcattgaa
gtagagctcaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggggcaaatcagcacaatatgcccaatctcatcaacaccatgatggag
ctgagaaagtgctgtaaccatccctacctgatcaatggggcagaggagaaaattctggaa
gatttccgaaaaacccacagccccgatgcccctgactttcagctgcaggccatgattcaa
gcagcagggaagttggtgctgattgataaactgctccctaagctgattgcaggtggtcac
aaagtcctcatcttctcccagatggtgcgctgcctcgatatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacggctgctgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagcaaa
gccgtgaaggtgtatcgtctcattactcggaactcctatgagcgggaaatgtttgacaaa
gccagcctaaagctgggcctggacaaggctgttcttcaggacataaaccgaaagggcagc
accaatggggtacaacagctctcaaaaatggaagtagaggacttgctccggaaaggggct
tatggagccctgatggacgaggaggatgaaggctccaaattctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatctact
tttgccaaggctagctttgtggcttcaggaaacaggacagatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaattggacaccgaagcaaagaatgaaaag
gagagcttagtgatcgaccggcctcgagtgagaaagcagaccaaacactacaactccttt
gaggaggatgagctcatggagttctcggagctagacagcgactcagacgaaaggcccacg
aggtccagacgcctcaatgacaaaaccaggcgctacctccgagccgagtgtttccgggta
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgacccacgggcgg
ttcaagtggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtctac
tgtgtcaagcattacaagggggacgagaagatcaagagcttcatttgggaactgatcaca
cctaccaaagacgggcaggcccagaccctccagaaccactcagggttgtctgctccagtc
cccagaggaaggaaggggaagaagacgaagaaccagctgctgctccctgagttgaagaat
gcagactggctggccacctgcaaccccgaggtggtcttgcatgatgacggctataagaaa
cacctcaaacagcactgcaacaaggtccttttgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaggcagctgataaagcgtttgaaggcacccctgccagggagcta
gacgtacccctgcccgacatcgactacatggagatcccagtggattggtgggatgctgag
gccgataagtcccttctgataggcgtgttcaaacacgggtatgagaggtacaatgccatg
cgagcagacccagcactttgcttcctggagaaagtcgggatgccagatgagaagtctctt
tctgcagaacagggtgttacagaggggacctcagacattcccgagcgaggcaacacggat
aaagaagacaacactgaagacaagttagatggcctgcagaaacaaatggagagttccagc
gatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagttccgtctgctctcacggctcggctcagacgt
ctggtcaccgtgtaccagcgctgtaaccgcaaggaactctgccgaccggaagtcctggga
ccaggtaaccaaggatactgggtccaggaagagatgttcaggagaacctcagaaatggat
ctcatcaacaaggaagctcaaaagaggtggactaggagagagcaagcagacttctacaga
gcagtgtcctcctttggggttgtttatgatcaagaaaagaaaacttttgactggacgcag
ttccgcatcatttcccgtttggacaagaagtcggatgagagcctggagcactatttttat
agctttgtggccatgtgccggaacgtctgtcgtctgcccacatggaaagatggtggtccc
ccagatcccagcatctatgtggaacccatcacggaggaacgggccgcgagaaccctttac
cgcattgagctgctgcggaaggtccgagagcaagtgctgaggtgtcctcagctgcacgag
cgcctccagctctgcaggcccagcctctacctcccagtctggtgggagtgtgggaagcac
gaccgagacctgctcgttggcaccgccaagcatgggctgaaccgcactgactattacatc
atgaccgacccccagctgtccttcctggatgcctacagaaactacgcccagcataagaga
acggacgcccaggcaccagaaagtctctgttgcctttaccagaccaactccaggctgtat
gaatctcttacgtacactcagatgagcaggacttcagagccccttgaaaatgaacctgag
aatctggtgaaaatagaaagtagagatgatcatctcactccacctgggggcagtttatct
gacatgacttgtgacaactttatttctaaagttcaggatgtcatttccatcacccacgat
gaaagtctgctgcctgagtccttggagagcatgatgtatgggaagaaggctctcattcga
gagccgggctctctccaggagagccccagtacaaacacagagcccagaaaggatgctctg
gccctctcggcaagcaaagatgggaactgccggcctgctggccatgaggcagaaatacct
tcagggccgtcttttatgagtagcttagaagcaggggtagctcagatgaacatcaaaaat
ggaaaacatctgttgctgtctctttcaagggaaggggatgtctgcagtgaggcagggcag
aggcctgaaagcattgggcagctagaagccaaacacttagcttccccttccttggatcag
ggaaatgaaagtgggtttgtagatatgtgccatcttagtgtctgtgattccagaagaagc
ttgtcatcagaccagcagttaattgatttattagaaaacaaaagtttagaaagtaaattg
gttttgagtcagaaccacagtgaagaggaggaggaagaggaagagaatgaggaggagaac
gtaggtgtgaccacaggcctgagggaaaggcccgaggttttgcatctagccgagcccact
gctaatatcctaagggaaaagagccaaggcctccctgtggatgaggtcaagagaggaagc
ctggaggccatgagccagcatcctagaccacagggggcttttcctccagcagcctgtcag
tgtcactgcaagcacacggagaggtgggcacgtggcctcgagaacgaggagtttgaagtg
gacaaatccaagggttataccccagacctgtacagaagcaaaacgaatagtatcacagtg
gagggtgagcccaccgctcctccatcagagccctttcagggaaagcacgagctgtcaaaa
gaaccttggaaggaaaatgcagaaggcaaaaaaggtttccctgcatatccagaagcaagt
gagctcaagtccgaagacatggattttgagagtaaagatgattacgacagagatgggaac
agccatgctcaagattacccagggaaatactctgaagaggagagcaagagctcagcatcc
ggcattgctggagacctcggggatgacctacaggaggctcgggctcccaccattgctcaa
ctgctccaggagaagaccctcttttccttctctgagtggccaaaggatcgcgtgataatc
aaccgcctggataatatctgccacgtggtgttaaaggggaagtggccttccagccagcag
tacgagcccccgggcacactgcccacccctgtgttaaccagcagtgctggttctcgaagc
agcatctcggagccagaaacatcagaacacagtttcagcagtggtgcagcattggtggcc
cagatccagaaggagagcttcctggctccagtattcacaaaggatgaccaaaagcacaga
cggccctatgagtttgaggtggagcgggatgcaaaggcgcggggtctggaccagttctcc
gccacccacgggcacccccccatcgtcctcaatggctggcacggggagtccgcaatagac
ctctcctgcacttcagaggggtccccaggagccgcgtctcctttcccactgagcgccagc
acccctaagatcggggctatcggttcacttcaaggagccctcggcatggacttgtctggg
attctgcaagctggcctgatccatccagtgacaggacagatcgtcaacggaagcctcaga
agagatgacgctgccacgaggaggaggagagggagacggaaacatgttgaaggagggatg
gacctcatctttttgaaggagcagacacttcaggcaggaatcttggaagtccatgaagac
ccagggcaggcgccctcaagcgcctcacatccggaagggccggtgtctgccgcttcagcc
cctgagccagccccagcagctggcagccaggctgagaaagccattcccagcaagagtctc
cttgactggctgaggcagcaggccgactactccttagaggttcctggctttggagcaaat
ttttcagacaaaccaaagcagaggaggccacgctgtaaggaacctggaaaattagacgtc
aactccctgagtggggaagagagggttcccgctgtccccaaggagccaggactaagggga
tttctcccagaaaacaagttcaatcacaccctggccgagcctgttcttcgagatgcgggc
ccccgcaggagggggaggcggcctcggagcgagctcctgaagacccctgccatcgtggcg
gactctccctcgggtatggggccactgttcatgaacggactgatcgctgggatggacctg
gtaggactccagaacatgagaaatctgccaggcatccccctcacgggcctggtggggttc
ccggccggcttcgccacgatgcccacaggcgaagaggtcaaaagcaccttgagcatgctg
cccatgatgctgccgggaatggccgcagtgccccagatgttcggtgtcgggggactcctc
aacgcacccatggccactgcctgcaccaacaccgctccagcacctctgtcaagcacaaca
aaaagtggcacagcagcgaccgaaaagactgtagaagacaagccgagtagccatgatgta
aaaacggacacgttagctgaagacaagcctggtcctggtccgttttctgatcagtccgaa
cctgcaataactaccagtagtcctgtggcttttaacccctttctcatcccaggagtgtct
cctggactcatttacccatccatgtttctgtccccgggcatgggcatggctctgccggcg
atgcagcaggccagacactctgaagcagtaggtctggagagccagaagcggaagaagaag
aaaacaaaaggggacagcctgaaccccaacccagagcctgctcccgggtccgaaaaggag
ccaggcggcgatcagaactgccccgaacccagggcccccgtccctccagagagaggacat
gtggcacaggccagggaagggggcctcaaagactccaacagtgacaccaattag
DBGET
integrated database retrieval system
