Prionailurus viverrinus (fishing cat): 125162044
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Entry
125162044 CDS
T09889
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pviv03041
]
125162044 (DDX1)
03016 Transfer RNA biogenesis [BR:
pviv03016
]
125162044 (DDX1)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125162044 (DDX1)
Spliceosome [BR:
pviv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125162044 (DDX1)
Transfer RNA biogenesis [BR:
pviv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
125162044 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
125162044
NCBI-ProteinID:
XP_047708537
LinkDB
All DBs
Position
A3:complement(129318627..129355827)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAADGYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagctgtagaggagatg
gattggctgctcccaactgatatccaggctgaatctattccactgatcctaggaggcggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaaccggtgcttcagtgctcaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtcagatggtctttgttgtcaaagcagagaagtgaaggagtggcac
ggatgcagagccactaaagggttgacgaaaggaaaacactactatgaagtatcctgtcat
gaccaaggattgtgcagggttggctggtcttccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcagcggatggttatgttgtcaaatcacagcacacaggtaatgcacaggtggcacaaaca
aagtttctccccaatgctccgaaagctctcatcgttgagccctcccgagagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgtcgcagcacgagatcagctctctgttttggataatggggta
gatatagtcgttggcaccccaggaagactagacgatttggtgtcaactgggaaactgaac
ttatcccaagttagattcctggtcctggatgaagctgatggacttctttctcaaggttac
tctgattttataaataggattcacagtcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcactcttttgacgtaaagaagctgtctgag
aagatcatgcattttcccacgtgggttgatttaaaaggagaagattctgtcccggatact
gtgcaccatgtggttgtcccagtgaaccccaaaactgacagactctgggaaaggcttggg
aaaaaccacattagaactgatgatgtacatgcaaaagataacacaaggcctggtgctaat
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggcg
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgcgat
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaaga
tttaagaaaggagatgtgaggttcttgatttgcacagatgtagccgccagaggaattgac
atccatggtgttccctacgttataaatgtcactttgcctgatgagaagcaaaactacgtc
caccgaattggccgagtgggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccacgtatgtagcagccgtggaaaagggtgttataac
acgagacttaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtct
gagatagaagaacatctgaattgcaccatttctcaggttgaaccagatataaaggtccca
gtggacgaatttgatgggaaagttacctatggtcaaaagagagccgctggtggtggaaac
tataaaggccatgtggatattttggcacctactgttcaagagttggctgcccttgaaaag
gaggcgcagacatcttttctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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