Prionailurus viverrinus (fishing cat): 125162130 Help Entry 125162130         CDS       T09889                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pviv  Prionailurus viverrinus (fishing cat) Pathway pviv04151   PI3K-Akt signaling pathway pviv04382   Cornified envelope formation pviv04510   Focal adhesion pviv04512   ECM-receptor interaction pviv04820   Cytoskeleton in muscle cells pviv04926   Relaxin signaling pathway pviv04933   AGE-RAGE signaling pathway in diabetic complications pviv04974   Protein digestion and absorption pviv05146   Amoebiasis pviv05165   Human papillomavirus infection pviv05200   Pathways in cancer pviv05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:pviv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     125162130 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125162130 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125162130 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125162130 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     125162130 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     125162130 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     125162130 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     125162130 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     125162130 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     125162130 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     125162130 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     125162130 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pviv04147]     125162130 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:pviv00536]     125162130 (COL4A1) Exosome [BR:pviv04147]  Exosomal proteins   Exosomal proteins of other cancer cells    125162130 (COL4A1) Glycosaminoglycan binding proteins [BR:pviv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125162130 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  125162130 NCBI-ProteinID:  XP_047708687 LinkDB All DBs Position A1:complement(80381122..80538198) Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFTGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGL PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGP KGFPGLQGQPGPPGFPVPELAGAPGFPGERGQKGDQGFPGTSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDRGAPGSPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPVGDKGQVGFPGNPGPPGQPGPKGEAGQVVPLPGPPGAQGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGVIGPPGLQGI RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSLGPPGLKGEKGFPGFPGLDMPG PKGDKGSPGLPGLTGQSGLPGLPGQQGTPGLPGIPGPKGEMGVMGTPGQPGSPGPAGVPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVAGFPGSPGE KGEKGSVGIPGIPGSPGPQGSPGSVGYPGSPGLPGDKGDRGLPGSAGIPGVKGEAGLPGK PGPAGPAGQKGEPGSDGIPGSAGEKGEPGLPGRAFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGAQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGAPGPKGDPGFQGLPGIGGSPGLTGSKGDIGPPGVPGFQGQKG LPGLQGAKGDPGDQGFPGSKGLPGPPGPPGPYNIIKGEPGLPGPEGPPGLKGLPGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctgcccgccgccctcctgctccacgag gagcgcagccgggccgctgcgaagggcggttgtgctggctctggctgcgggaagtgtgac tgccatggagtgaagggacagaagggcgaaagaggcctcccgggcttgcagggtgtcatc gggttccccgggatgcaaggaccagagggaccgcaggggcccccgggacagaagggtgac actggagaacccggactgcctggaacaaaggggacaaggggacccccaggagcatcaggt tacccgggaaacccaggacttcctggtattcccggccaagatggcccccccggtcctcca ggtatccctggatgcaatggaacaaagggtgagccagggcctctggggcctccgggtttg cctggattcactggaaatcccggaccaccagggttaccgggaatgaagggggatccaggt gaaataattggccacgtgcctgggaccctgttgaaaggcgaaagaggatttcccggactc ccaggagcaccaggctcgccgggactgccagggctgcaaggtcctgtcggccccccagga tttaccggaccaccaggccctccaggtcctcctggccctccaggtgaaaaggggcaaatg ggcttaagtttccaaggcccaaagggtgacaagggtgaccaaggggtcagtgggcccccg ggggttccaggacaagctcaggttcaagaaaaaggagactttgccactaaaggagagaag ggtcagaaaggtgaacctggatttcagggaatgccaggggttggagagaaaggggagccc ggaaagccagggccccgaggaaaacctggcaaagatggcgaaaaaggagaaaaagggagt ccaggcttcccaggtgacgcagggtacccaggactccccggacgagaaggtttcaaggga gacaaaggtgaagcaggtcccccaggcccacctggaatcgtgatcggcacgggacccttg ggagaaaaaggagagcgggggtacccagggtctccagggttgagaggagagccaggcccc aaaggtttcccaggattacaaggccagccaggccctccaggcttcccggtaccagagctg gcaggtgctcctggctttcccggtgaaagagggcagaaaggtgaccaagggtttccaggc acgtctttgccgggaccaagtggaagggacgggctcccgggtccccccgggcctcctggg ccccctggacagccaggtcacacaaatggaattgtggagtgccagcctggaccgccaggg gaccgaggtgcccccggaagtccggggcaaccagggctgacgggcgaagtcggagaaaaa ggtcagaaaggagacagttgcctcatctgtgacacagcaggacttcgtgggccccctgga ccacagggacccccgggagaaataggtttcccgggacagccaggggccaagggcgacaga ggcttacccggcagagatggcctggaaggactgcctggaccgcaaggtgtgccagggctg atgggccagcccggagccaagggagagcctggcgagatttacttcgacgcacggctcaaa ggagacaaaggggacccgggcttcccaggccagcccgggatgccaggcagagcaggcact ccggggagagacggccacccgggtctgcccggccccaaaggctccccgggttcagtaggg ttgaaaggagaacgtggcccccccggaggagttggattccctggcagtcgtggcgacatc ggccctcctgggcctccagggtttggccccatcggccccgttggtgacaaaggacaagtg ggttttccagggaaccctggacccccaggccagccaggtcccaagggtgaagctggacaa gttgtgcccctacctggtccccccggagcacaagggcttccggggtccccgggtttccaa ggaccccaaggtgaccgaggttttcctggaacgccgggaaggccaggcctcccgggagag aagggtgctgttggccagcccggaatcggatttccagggcctcctggccccaaaggtgtc gatggcctgcctggagacgtgggacctcccgggagcccaggccgcccaggatttaatggc ttgcctggcaacccgggtgtgcccggccaaaagggagagcctggcatcggtctgcctgga ctcaaagggttgcctgggcttcccggcatccctggcacacctggggagaagggaaacatc gggggaccaggcgttccgggagagcatggtgttatcggccccccaggcctccagggaatc agaggtgacccaggaccacctggattacaaggtcccaagggagcccctggagttcccggg ataggcccacctggagcgatgggcccccctggaggacagggaccaccagggtccttaggc cctcctggactgaagggagagaagggcttccccggatttccaggcctcgacatgccgggc cccaaaggagacaaagggtccccagggctgcccggcctgacagggcagtctgggctcccc ggtcttcccggacagcagggcacgcctggccttcccggcattccaggtcccaagggagag atgggtgtcatggggaccccggggcaacccggctcgccaggcccggcgggagtgccagga ttgcccggagaaaaaggggaccacggcttcccgggctcctcggggcctaggggagacccc ggcttcaagggcgacaaaggagatgtgggtctccctggcaagcctgggtccatggataag gtggacatgggcagcatgaagggtcagaagggagaccaaggagaaaaaggacaaattgga ccaactggtgataaaggatcccggggagaccctggaaccccgggaatgccaggaaaggac ggccaggcagggcatcctgggcagccaggacctaaaggtgaccccggcatcggcgggacc ccgggggctccagggctccctggacccaaaggatcggttggtggaatgggcctgccagga acacccggagaaaaaggcgtgcctgggatccctggcccgcagggcgtccctggcttaccc ggggagaaaggcgcaaagggcgagaaagggcaggcaggcctccctggcattgggattccg ggccggcctggagacaagggagatcaaggggttgcaggatttccgggaagtcctggagag aagggagagaaaggaagcgtggggatcccggggatccctggctcccctggcccccaagga tcccctgggagcgttggctatccaggaagccccggcttgcctggggataaaggggacaga ggcctcccaggatcggctggcattcccggtgtcaagggagaggcaggtcttcctgggaaa cctggccccgcgggcccagccggccagaaaggggagcctggcagtgacggaatcccgggg tcggcgggagagaagggggaaccaggcctgcctggaagagcattcccagggttcccaggg gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccgggagtcca ggaattcccggatccaaaggagagcaaggattcatgggtcccccggggccacaaggacag ccgggcttacccggagctccgggccacgctgtggaggggcctaaaggagaccggggcgca cagggtcagcctggcctgccagggcttccgggacccatggggcctccagggctccccggg cttgatggactgaaaggtgacaaaggaaacccaggctggccgggggctcccggtgctcca ggacccaagggagatccaggattccagggcctgcctggaatcggtggctctccaggactc acgggctctaagggtgacataggacctccgggagttccaggatttcaaggtcagaaaggc ctccccggcctgcagggagctaagggcgatccgggtgaccagggcttccctggaagcaaa ggcctccccgggcccccaggccccccagggccctacaacatcatcaaaggagagccagga ctccctggtccagagggtcctccaggtctgaaggggcttccgggaccaccaggccccaaa ggacagcaaggtgtgacaggatccgtgggcttgcctggacctccaggtgttcccggtttt gacggtgctcctggccagaaaggagagacgggaccctttggcccccctggtccaagaggg tttccaggcccgccaggccccgacgggttgccaggatccatgggtcccccaggcacccca tctgttgatcatggcttcctggtgacccggcacagtcagacgacggacgacccgcagtgt cctcctgggaccaaaattctttaccacgggtactccctgctctacgtgcaaggcaacgag cgggcgcacggccaggacttgggcacggctgggagctgcctgcgcaagttcagcacgatg cccttcctgttctgtaacatcaacaatgtgtgcaacttcgcctcccgaaatgactactcc tactggctgtccacccctgagcccatgcccatgtctatggcgcccatcgccggcgacaat atcagaccgttcattagcaggtgtgcggtgtgcgaggctccagccatggtgatggccgtg cacagccagaccatccagattccgcagtgccccagcggctggtcctccctctggattggc tattccttcgtgatgcacaccagtgctggtgccgaaggttctggccaagccctggcatcc cccgggtcctgtctggaagagttcaggagcgcgccattcatcgagtgccacggacgtggg acttgcaattactacgcgaacgcgtacagcttttggcttgccacgatcgagagaagcgag atgttcaagaagcccacgccgtccaccttgaaggcgggggagctgcgcacacacgtcagc cgttgccaagtctgtatgagaagaacataa

DBGET integrated database retrieval system