Prionailurus viverrinus (fishing cat): 125162283
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Entry
125162283 CDS
T09889
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv01524
Platinum drug resistance
pviv03430
Mismatch repair
pviv05200
Pathways in cancer
pviv05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125162283 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125162283 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
125162283 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
125162283 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pviv03400
]
125162283 (MSH2)
DNA repair and recombination proteins [BR:
pviv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125162283 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
125162283
NCBI-ProteinID:
XP_047709090
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Position
A3:67207038..67288230
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AA seq
934 aa
AA seq
DB search
MAVLPKETLQLESAAEIGFVRFFQTMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPPGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRGDFFTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
RLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQRLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDELEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTDETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKSQDYGEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITKKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgccgaaggagacgctgcagctggagagcgcggccgagatcggcttcgtg
cgcttcttccagaccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggccgcccgagaagtgttcaagacc
cagggggtggtcaagtacatagggccgccaggaacaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcctcgaaggagaatgactggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaacgat
atgtcagcttccattggtgttgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggtgttgggtatgttgactccatacagaggaagctaggactttgtgagttccctgat
aacgatcagttctccaatctggaggctctcctaattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaagctgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagaggtgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcagatgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagtcagtacatg
aggttggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgcattgctaaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagacta
aatttagtggaagcttttgtagaagatgcagaattgaggcagagtttacaagaggattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaggcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttattcgggct
ctggaaaaatatgaaggaaaacaccagagattactcttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaacattagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgagttggaaaagaagatgcagtcaacattagtaagtgcagca
agagatctaggcttggatcctggcaaacagattaaactggattccagtgcacagtttggt
tattacttccgtgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgagtatgaggaagcccaggatgcaattgttaaagaa
attgtcaatatttcttcaggttatgtagaaccaatgcagacactcaatgatgtattagct
cagctagatgctgttgtcagctttgcacatgtgtcaaatggagcacctgttccatatgta
cgaccagtcattctggagaaaggacaaggaagaattacgttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccctaatatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtggactgcatcttagcccgagtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaactgggaagaggaacctctacttacgatggattt
ggattagcctgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcagataccaactgttaataaccta
catgtcacagcactaactactgatgagaccttaactatgctgtatcaggtgaagaaaggt
gtctgtgaccaaagtttcgggattcatgttgcagagcttgcaaatttccctaggcatgta
atagagtgtgctaaacaaaaagccctggaactagaggagtttcagaatattggaaaatca
caagactatggtgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagaatttttatccaaggtgaagcaagtgccttttactgaaatgtca
gaagaaaacatcacaaaaaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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