Prionailurus viverrinus (fishing cat): 125162350
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Entry
125162350 CDS
T09889
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125162350 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pviv04812
]
125162350 (SPAST)
Enzymes [BR:
pviv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125162350 (SPAST)
Membrane trafficking [BR:
pviv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125162350 (SPAST)
Cytoskeleton proteins [BR:
pviv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125162350 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
Mg_chelatase
AAA_16
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
125162350
NCBI-ProteinID:
XP_047709203
LinkDB
All DBs
Position
A3:complement(114999795..115052126)
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AA seq
616 aa
AA seq
DB search
MNSPGGRGKKKGSGGGSSPVPPRPPPPCLTPARPAPRPAPPPESQHKRNLYYFSYPLFIG
FALLRFVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGEAERVRAFH
KQAFEYISVALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPAAGTHKSTPKTNRTNK
PSTPTTAVRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggcggcagcagcccggtg
cctcccaggcctccgcccccctgcctgacccccgcccgtcccgcccccaggccggccccc
ccgcccgagtcgcagcataagcggaacctgtactacttctcctacccgctgttcataggc
ttcgcgctgctgcggttcgtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggctgccaagaggagctcccgggccgcgccggcgccggcc
tcggcctcgcccccggcaccagtgccgggcggggaggccgagcgcgtccgagccttccac
aaacaggccttcgagtacatctccgttgccctgcgcatcgatgaggacgagaaagcagga
caaaaggagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgtcatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggaccgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcccaaacggatgtctataatgacagtactaacttgacatgc
cgcaatggacatctccagtcagaaagtggagctgttccgaaaagaaaagatcccttgaca
cacactagtaattcactgcctcgttcaaaaacagttatgaaaactggatccacaggtctt
tcaggccaccacagagcacctagttgtagtggtttatccatggtttctggagtgagacag
ggacctggtcctgcagctggaactcataagagtacaccaaaaacaaacagaacaaataaa
ccttctacccctacaactgctgttcgcaaaaagaaagacttgaagaattttaggaatgtg
gacagcaaccttgctaaccttataatgaacgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctggacaagagttggcaaaacaagccttgcaagaaattgttattctt
ccttctctaaggcctgagttgttcacagggcttagagctcctgccagaggattgttactc
tttggtccacctggaaatggaaaaacaatgttggctaaagcagtagctgcagaatccaat
gcaaccttcttcaacataagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcagccttctataatttttata
gatgaagttgatagccttttgtgtgaaagaagagaaggagaacatgatgctagtagacgt
ctaaaaactgaatttctaatagagtttgatggtgtacaatctgctggagatgacagagtg
cttgtaatgggtgcaactaacaggccacaagagcttgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttgccaaacgaggagacacgactacttttacttaaaaat
ctattatgtaaacaaggaagcccattgacccaaaaagaactagcacaacttgctagaatg
accgacggatattcaggaagtgatctaacagctttggcaaaagatgcagcactgggtcct
atccgagaactgaaaccagaacaagtaaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtgagccctcaaacc
ttagaagcatacatacgttggaacaaggactttggcgataccactgtttaa
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