Prionailurus viverrinus (fishing cat): 125162684
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Entry
125162684 CDS
T09889
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125162684 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pviv04131
]
125162684 (TGFBRAP1)
Membrane trafficking [BR:
pviv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125162684 (TGFBRAP1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
125162684
NCBI-ProteinID:
XP_047709932
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Position
A3:55413243..55476772
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AA seq
859 aa
AA seq
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MMSTKAFTLVSAVERELLVGDKEQGHIECVECCGKNLYVGTSDCIVYHFLLEERAQPAGT
ATFSATKQLHRHLGFRKPVSELRAASALNRLLVLCDNSITLVNMMTLEPVPSGARIKGAV
ALALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFL
CLALTTQYIILNYNTGVAQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAICFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENSCLLTDSA
AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDIHDSTRSDLYEYVVDFLTYSLDQE
LVWKYADWVLQKSEEVGVQVFTRRPLDEQQNSFNPDSIITCLKKYPKALVKYLEHLVMDR
RLQKEEYHTHLALLYLDEVLQQRPGANSKGAEATETQAKLRHLLQKSDLYRVHFLIDRVR
GAGLPMESAILHGKLEEHEEALRILVHELRDFSAAEDYCLWRSEGRDPPYRQRLFHTLLA
MYLQPGPSVPELAVAATDLLNHHAAEFDAARVLQLLPGTWSVQLLRPFLTGAVRDSVHTR
RTTQVAVGLAKSENLIYKYDKMKLKGSSVRLSDKKLCQMCQNPFREPVFVRYPNGGLVHT
HCAAGRHTNPSPPGPGART
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaccaaggccttcacgttggtctctgccgtggagcgggagctgctggtaggt
gacaaggagcaggggcacatcgaatgcgtggagtgctgtggcaagaacctgtacgtgggc
accagtgactgcatcgtctaccacttcctgctggaggagagggcgcagcctgcagggacg
gccacgttctctgccaccaagcagctgcaccggcacctgggcttcaggaagccagtgagt
gagctgcgagcggcctcggccctcaacaggctgctggtgctctgtgacaactccatcacc
ctggtcaacatgatgaccctggagcctgtcccctcgggggctcgcatcaaaggggccgtg
gcattggccttgaacgagaaccctgtgagcggagacccgttctgcgtggaagtctgcatc
atctcggtcaagcgcaggaccatccaggtgttcctggtgtacgaggaccgggttcagatc
gtcagggaggtgtcgacgccggagcagcccctggccgtggctgtggatggccacttcctg
tgcctggctctgaccacccagtacatcatcctgaactacaacacgggcgtcgcccaggac
ctgtttccttactgcagcgacgagaagcgacccatcgtcaagaggatcgggagacaggag
ttcctcctggcaggccccggaggactgggcatgtttgccacggttgccggtatatctcag
cgagcccccgtgcactggtcggagaacgtgattggggcagccatctgcttcccgtatgtc
atagctctggataacgaattcatcaccgtgcacagcatgttggaccagcagcaaaagcag
accctgccctttaaggagggccacattctccaggattttgaaggaagagtgattgtcgcc
acaagtaaaggagtttacatcttggttccgttacccctggaaaagcaaatacaggatctt
ctagcaagccgtcgagtggaagaggctttggttttagccaaaggagcccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacagaaggattctgcagcaggcggggttcatacag
ttcgcacaacttcagtttctggaagctaaagagctcttcagaagcggccagcttgacgtc
cgggagctgatctctctctaccccttcctgttgcccacctcttcctcattcacacggtcc
caccctcctctccatgagtatgcagacctgaaccagctgacccagggggaccaggagaag
atggccaagtgtaagcgcttcctcatgagctacctgaacgaagtccgcagcacagaggtc
gcaaatggctacaaagaggacatcgacacggccttgctcaagctgtacgcggaggccgac
cacgacagtctgctggacctcctggtcaccgagaactcctgtcttctgacggacagcgct
gcttggctcgagaagcacaagaagtattttgcacttggactgctctatcattataataac
caagacgctgcggcagtgcagttatgggtgaacattgtgaacggggacattcacgactcc
actcgctcagacctatacgaatatgtcgttgatttccttacctatagcttagaccaggaa
cttgtgtggaagtacgctgattgggtcctgcagaaaagtgaggaggttggagttcaagtt
ttcaccaggagacctttggatgaacagcagaacagttttaatcccgacagcattatcact
tgccttaagaaataccctaaagcccttgttaagtatctggaacatctggtcatggacagg
agactgcagaaggaagagtaccacacacacctggcgctcctctacctggacgaggtgctg
cagcagaggcccggcgccaacagcaagggtgcggaagcgacggagactcaggcgaagctg
cgacacctgctccagaagtctgacttgtaccgagtccacttcctgatagatagagtccgg
ggcgccggcctccccatggagagcgccatcctgcacggcaagctggaggagcacgaggag
gccctgcgcatcctggtgcacgagctgcgggacttctcggcggctgaggactactgcctg
tggcgctccgagggcagagacccgccgtaccggcagcggctcttccacacgctgctggcc
atgtatctccagcccggcccctccgtgcccgagctggccgtggccgccacggacctcctg
aaccaccacgcagccgagttcgacgccgcccgcgtcctgcagctgctgccgggcacctgg
tcggtgcagctcctgcgcccgttcctgaccggggccgtcagggacagcgtgcacacccgg
aggaccactcaggtggccgtcggcctggccaagtctgaaaacctgatctacaagtacgac
aagatgaagttgaaaggaagctcagttcggctttcggacaaaaagctctgccagatgtgc
caaaatccctttcgtgagcccgtgtttgttaggtatccaaatggtggtctcgtccacacc
cactgtgctgccggcagacacacgaaccccagcccccccggccctggcgcacggacttga
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