Prionailurus viverrinus (fishing cat): 125163332
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Entry
125163332 CDS
T09889
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125163332 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125163332 (FIP1L1)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125163332 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
125163332
NCBI-ProteinID:
XP_047710825
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Position
B1:complement(163550967..163629929)
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AA seq
603 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEDTRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaagatgaaactgctgaaaacggcgtacctaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgacgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaaaacagggggaagagtttatggaactacaggaacaaaagtcaagggagtggac
ctcgatgcacctggaagcattaacggagttccactcttggaggtagatttggattccttt
gaagataaaccatggcgtaaacccggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaaggacga
actggaaattcagagaaggaagcagcacttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccgagcagaaacagcacctcctctcagtctcag
acaagtactgcctccagaaaagccaattccagcgttgggaagtggcaggaccgatatggg
agggccgaatcacctgacctaaggagattacctggggcaatcgatgttattggtcagact
ataacaattagccgagtagaaggaagacgacgggcaaacgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctcccacccaccttccacctcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccatctcttatcccaacaatagaaagtgga
cattcctctggttacgatagtcgttctgcacgtgcttttccatatggcaatgttgccttt
ccccaccttcctggttctgctccttcatggcctagtcttgtggataccagcaagcagtgg
gactattatgcaagaagagagaaagaccgagatagagacagagaccgagaccgggagcga
gaccgtgatcgagacagagaaagagagcgcaccagagagagagagcgggagcgtgatcac
agtcctacaccaagtgtttttaacagtgacgaagaacgatacagatacagggagtatgcg
gaaagagggtatgagcgtcacagagcaagtcgagagaaagaagaacgacacagagagaga
cgacacagagagaaggaggacaccagacacaagtcatctcgcagtaatagtagacgtcgc
catgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaaatctaaaagaagc
aaagaaggaaaggaagctggcagtgagcctgccccggaacaggagagcaccgaagctgca
cctgccgaatag
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