Prionailurus viverrinus (fishing cat): 125163424
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Entry
125163424 CDS
T09889
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv00100
Steroid biosynthesis
pviv01100
Metabolic pathways
Module
pviv_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125163424 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pviv01006
]
125163424 (FDFT1)
Enzymes [BR:
pviv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125163424 (FDFT1)
Prenyltransferases [BR:
pviv01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125163424 (FDFT1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
125163424
NCBI-ProteinID:
XP_047711064
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All DBs
Position
B1:52941749..52982747
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AA seq
485 aa
AA seq
DB search
MEEKFYASPAISMAAAACGTKAMSLFKRTLVLSPAAAPRGTGAGSPPRGCPLPPAAWPSK
DWPRGEGVCGRLRSPPVAGRLPHSHSCSAASPTAVCVLCPQDSLSSSLKTCYKYLNQTSR
SFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYM
ESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYC
HYVAGLVGIGLSRLFSASELEDPLVGEDVERANSMGLFLQKTNIIRDYLEDQREGREFWP
QEVWSKYVKKLGDFAKPQNIDSAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIP
QVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSS
DPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYV
QTGEH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaattctacgccagccctgcgatttccatggccgcagccgcctgcggcacc
aaggccatgtccctgttcaagcggaccttggtgctgagccccgccgcggcgccccggggt
acgggcgcgggctccccgccacgcggctgccccttgcctcccgccgcctggccctccaag
gactggccgcgcggagagggcgtctgcggcaggctgcggagcccaccggtggccggccgc
ctgccccattcccactcctgctccgccgcgtctcccaccgccgtgtgtgttctctgcccg
caggattcgctcagcagcagcttgaaaacttgctacaagtatctcaatcagactagtcgc
agtttcgcagctgtcatcgaggcgctggatggggaaatgcgccatgcggtatgcatattt
tatctggtcctccgggctctggacactctggaagatgacatgaccatcagtgtagaaaaa
aaggtcccactgttgcacaacttccactcttacctttatgaaccagactggcggtatatg
gagagcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctcgagttt
agaaatctggctgagaaataccaaacggtgattgttgacatttgccggaaaatgggattt
gggatggcggagtttttggataaacacgtgacatccgaacaggagtgggacaagtactgt
cactatgtcgccgggctggtgggaattggcctttcccgtctgttctcagcctcagagtta
gaggaccccctagttggtgaagatgtagaacgtgccaattctatgggcctgtttctgcag
aaaacaaacatcattcgtgattatctggaagaccaacgagaaggaagagagttttggcct
caagaggtttggagcaagtatgttaagaagttgggtgattttgctaagccacagaatatt
gactcggctgtgcagtgcctgaacgaacttataaccaacgcactacaccacatcccagat
gtcatcacttacctttcaagacttagaaaccaaagtgtgtttaacttctgtgctattcca
caggtaatggccattgccactttggctgcctgttacaataaccagcaggtgttcaaaggc
gtagtgaagatccgaaaaggacaagcagtaactctaatgatggatgccaccaatatgcca
gctgtcaaagctataatataccagtatatggaagagatttatcatagaattcccagctca
gacccatcttctagtaaaacaagacagatcatctccaccatcaggacacagaatcttccc
aattgtcagctgatttcccgaagtcactactcccctatttacctgtcatttgtcatgctc
ttggctgccctgagctggcagtatctgagcaccctgtcccaggtcacagaagactatgtt
cagactggagagcactga
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