Prionailurus viverrinus (fishing cat): 125163636
Help
Entry
125163636 CDS
T09889
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125163636 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125163636 (SMARCAD1)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125163636 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
125163636
NCBI-ProteinID:
XP_047711624
LinkDB
All DBs
Position
B1:complement(127469080..127548286)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEVPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPEATENERKAGISYFKNQRGIQYIDLSSDSEDAVSPNCSSTVQERKFNKDTV
IIVSEPSEDEESQSLPTMAGRHNDDISEMEDFSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEAYEEDEFNDDQSIKKKRLDHGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDM
QYASQSEFPNGKEASSRSQNYPKNSAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINSFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggagtaagattgaggaagtg
cccgaagcaaccccccaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaggttagcagggcaggcacacctgattcagatataact
gaaaaaacagaagattctagtgttccagaagctacagaaaatgaaagaaaagctggtata
tcctatttcaagaatcaaaggggaatacagtatattgatctgtcttctgatagtgaagat
gccgtgtctccaaattgttccagtacagtccaagagagaaagttcaacaaagacacagtg
attatagtttctgagccatctgaagatgaagagtcccagagccttcctaccatggcaggt
agacataatgatgatatttcagaaatggaagacttttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaacttttcccacaaagaagtgacagtgacttacttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcatcttcttcagaggcatatgag
gaagatgagtttaatgatgatcagtctataaaaaagaaaagactggatcacggagaagaa
tcaaatgagtctgcagaatctagcagtaattgggaaaaacaagaaagtattgtattgaaa
ttgcaaaaggaatttcccaattttgataaacaggaactaagggaagtactcaaggaacat
gaatggatgtacacagaagctttagaatctttaaaagtgtttgcagaagaccaagatatg
cagtatgcttcacaaagtgaatttccaaatggaaaagaagcttcttcaagaagtcagaat
tatcctaaaaattcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaataagaaacgtaaaaaaaatgtatttaatcctaagagagttattgaagactct
gaatatgattcgggttctgatgtcggcagctcactagatgaggactacagtagtggtgaa
gaagtgatggaggatggctataagggtaaaattcttcactttcttcaagatgcttcaatt
ggtgaactaactttgattcctcagtgttctcagaaaaaggctcagaagataactgaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatca
gaagatttgatatggcattgtaaaacactgatccaagaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacatagaacaaccctccattctaaaccagagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctaggaaaaactattcaagccattgcattcctggcatac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccagcatcaactatagat
aactggttgagagaagttaatttatggtgccccactttaaaggtgctctgttactatggc
tctcaagaagaacgtaaacagattagatataacatccatagtaaatacgaagaatataat
gtaattgtgaccacgtataattgcgcaatcagcagttctgatgatcgtagtctgtttcga
aggctgaaacttaattatgctatttttgatgagggccatatgctgaagaatatgggctct
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacgggcaca
cccgtacagaataatctgttagaactcatgtcgctattgaattttgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcctctaagacaaaatcagcagat
gagcaaagtatatatgaaaaagagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctacctcccaagaaagatcgaatt
gaattgtgtgcaatgtcagaaaaacaggagcaactctatttgggtcttttcaacagatta
aaaaaatctatcaataatatggaaaaaaatacagagatgtgcaatgtaatgatgcagttg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaagctcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgatttgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
catattaatagcttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatggaaagactcagatttctgaaaggattcatctaattgacgagtttaatacc
gatatggatatcttcgtgtttctgctgtcaacaaaagctggtggcctaggaataaatctg
acttcagcaaatgttgttatacttcatgatattgactgtaacccttacaatgacaagcaa
gcagaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaata
agccaagggacaattgaagaatccatgctaaaaattaaccaacagaaattgaaactagaa
caagatatgaccacagtagatgaaggtgatgaagggagtatgccagcagatatagccaca
ttactaaaaacgtcaatgggcctgtga
DBGET
integrated database retrieval system
