Prionailurus viverrinus (fishing cat): 125164637
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Entry
125164637 CDS
T09889
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03015
mRNA surveillance pathway
pviv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125164637 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
125164637 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125164637 (PABPC4L)
03041 Spliceosome [BR:
pviv03041
]
125164637 (PABPC4L)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125164637 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
125164637 (PABPC4L)
Spliceosome [BR:
pviv03041
]
Complex C
Other components
Complex C specific factors
125164637 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_10
RRM_occluded
RRM_MARF1
RBD_RDR6
Nup35_RRM_2
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
125164637
NCBI-ProteinID:
XP_047713429
LinkDB
All DBs
Position
B1:91693829..91706463
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AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLK
LADAQRALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSA
FGKILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNL
DDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSK
PLYIALAQKP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggcagccaagtaccgccaggcgtcgctgtacgtgggtgacctccacgcagat
gtcaccgaggacttgctgttcaaaaagttcagcaccgtggggcctgtgctgtccatccgc
atctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaacttcctgaag
ctggccgatgcccagagggctctggacacgatgaactttgacacgataaagggcaaaccc
atccgcctcatgtggtctcagcgcgatgcctacttaaggaagtcgggcatcgggaacgtg
ttcatcaagaatctggacagatccattgataacaaaaccctctatgaacatttttcagcc
tttgggaagatcctttcctccaaggtgatgagtgatgaccaaggatctaggggctatgca
tttgtgcactttcagaaccagatcgcagccgacagggccatcgaggagatgaatggggct
ctgcttaaggactgcaggctgtttgtcggcagattcaaaaaccgtaaagatcgggaagcc
gagctccgcaacaaggccaatgaattcaccaatgtttacatcaaaaactttggagatgac
atggatgatgagagactgaaggaagttttcagtaaatatggtaaaaccctgagtgtgaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaggccgttgaagaaatgaatggaaaggatataaacggacagctgctt
tttgtaggccgggcgcaaaagaaatccgagcgacaggccgagttaaagcaagtgtttgag
cagctgaaacaggaaagatttcggaggtgccaaggcatgaagctctatattaagaatctc
gatgacaccattgatgatgagaaactgtggagggaattttcttcatttggatcaattagc
agagtcaagataatgcgggaagaagggcgaagcaaagggtttggcttgatctgcttctcc
tctcctgaggaggccactaaagcaatggctgagatgaatggccgtatcttgggctccaag
ccactctacattgccctggcccagaagccctag
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