Prionailurus viverrinus (fishing cat): 125165075
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Entry
125165075 CDS
T09889
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein
KO
K12600
superkiller protein 3
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125165075 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pviv03019
]
125165075 (SKIC3)
Messenger RNA biogenesis [BR:
pviv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125165075 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_17
TPR_14
TPR_8
TPR_11
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
ARM_TT21_C
Sel1
ARM_TT21_2nd
Fis1_TPR_C
TPR_5
ARM_TT21_5th
TPR_30
TPR_20
TPR_15
TPR_6
Suf
BTAD
DUF7017
Motif
Other DBs
NCBI-GeneID:
125165075
NCBI-ProteinID:
XP_047713658
LinkDB
All DBs
Position
A1:complement(158126229..158234595)
Genome browser
AA seq
1565 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKEDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWHKLIKTRQEEGADNQELHQLWRRLTQLLAESTEDQNNETQQ
LLLTAFENALGLSENIPSEDHQVLYRHFIQCLSKFPHEIARLKKACEGMINIYPTVQYPL
EVLCLHLIESGSLTDEGQQYCRRLVEMDSKSGPGFIGLGIKALQDRKYEDAVRNLTEGLK
ESPLCTTGWYHLAEAQVKMHRPKEAVLSCSQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYPQAEKCFQRALEKNAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNNTNDLKELLEKSLQCLKKAVRLDSKNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIVQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLRKEAAGAYQRAMLLLQSVEDQDTYN
VTVRNYGRLLCSIGEYNKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSV
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLTMQDPTL
SKAALNELLKHIKQKDSNYHKCLLSSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTHRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSSEGEKNIALKTIQ
KAALLSPGDPAVWAGLMAACHAEDKLALVDNTEPKRMDLYLALLSAVSASIRDKEFLENY
NQSLEKWSLSQAVTGLIDTGRLAEAEGLCTKNLKSNPNQPAVILLLRQVQCKPLLDSQNT
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQCQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALKACMANIPNNHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARE
TRRLLEKVVYHQPGFPKSIVSAARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQ
KLSSQ
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattgctggcttggcaggggtta
gcaagtttatatgagaaatgtaatcacataaatgctaaggaagacttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctatattaccaagaaaagaaacacctagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagcttcatcagctgtgg
aggagattgactcagttgctggctgagagtactgaggatcagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactgggcttatcagaaaatattcctagtgaagat
caccaagtactttatagacatttcattcagtgtttatccaaatttcctcatgaaattgct
aggttgaagaaggcctgtgaaggaatgataaacatctatcccactgtacaatatccatta
gaagtgctttgtttgcatttgattgaatcaggcagtcttactgatgaaggacagcaatat
tgtcgcagactagtggaaatggattcaaaaagtggtccaggcttcattggtttggggatt
aaagcattacaagacagaaagtatgaagatgctgttaggaacctaactgaagggttaaaa
gaaagccctctttgcacaacggggtggtatcatctggccgaagcccaggttaaaatgcat
agacctaaggaagctgttctttcatgcagtcaagctctgaagaacatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcaatctgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaataaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttgattcattttaccaaaaaggactatccacaagcagag
aaatgtttccagagagctctggagaaaaatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttact
cactttctaaaggctgccagactggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagcg
tttgagttagatgatactgatgctgaatctggagctgcagcagttgacttaagtgtggag
cttgaagagatggaaactgccttagccatcctaacaacagtaactcaaaaggcaagtgct
ggaacagcaaaatgggcctggctgaggcgcggactgtactatttgaaagctggtcagcat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctataccacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagattatgtgccagctttgaaaggtttgggcgaatgccatcttatgatggca
aaagcagctctagtggattatcttgatgggaaagctgtggactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtacgctgtctcaccatctaaagtaaatgttaatgtttta
ggagtcctcctaggtcagaaagaaggaaaacaagtattaaagaagaatgagctcctccat
cttggaggaaggtgttatggtcgtgcattaaaactgatgtccacatctaatacatggtgt
gatctcggaattaattattaccgtcaagcacaacatctagcagaaacaggcaacaacaca
aatgatcttaaagagttgttggagaaatctttacagtgtctgaaaaaggcggtgagactc
gacagtaaaaaccatttatactggaatgctcttggcgtggtttcatgttacagtggtatt
ggaaattacgcccttgctcagcattgtttcatcaagtcaatccaatcagaacaaattaat
cctgttgcatggaccaacttgggagtcttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttacttaatgtgctggattgga
caagctcttatcgcagagacagttggaagttatgacaccatggatcttttcaggcacact
acagagcttagtatgcataccgagggagcaataggttatgcttattgggtctgtacaaca
ttgcaagataaaagcaacagagatactgagctgtaccggtacaatatcgttcagatgaat
gctattccagccgcacaagttgttttgagtaaatacatagaaagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctacaactgagaaaggaagcagca
ggtgcataccaaagggcaatgttattgttacaaagtgtggaagaccaagatacttataat
gttacagtaagaaattatggcagattattatgttccattggtgaatataataaagctatc
caggcttttaagtcaacacctcttgaagagttagaagacatcataggttttgcattggct
ttatttatgaaaggtctatataaggaaagcagcaaagcctatgagagagccttgtctgtt
gttgaatcagagcaggacaaagcgcatatcttgacagctctagcaataacagagtataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggaacca
accacagaaagccttcaagccttgtgtgctctaggattgacaatgcaggatcctacactg
tcaaaagcggcgcttaatgaattactgaagcacatcaaacagaaagacagtaattatcac
aagtgccttctttcttcagcaatttatgcactgcaaggccgcagtgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtagttgctcagtatactcaccgaagtgcaaagggaggtgctgttgcaggaaatgtg
gctcatattttggactcaaatcatggaaagaaggcgttactgtatactgcggtaaatcag
ttagctatgggaagcagttcatcagaaggtgaaaaaaatattgcactaaagaccattcag
aaagcagctcttctttctccaggtgaccctgccgtctgggctgggctaatggcagcctgt
catgctgaagataaactggctctagtggacaacactgagccgaagagaatggatttgtac
ttggccctgttatctgctgtttctgcttcaattagagacaaagaattccttgaaaattat
aaccaatctcttgaaaagtggtctctctcccaagctgtcactggtctaatagacacagga
agactagctgaagctgaaggcctctgcacaaagaatttaaaaagtaaccctaatcagcca
gctgttatcttacttctgagacaagttcagtgtaaaccactcctggattcacaaaacact
ctcccagatgctgtacttgaagagctgcagaaaacagtcatgtccaattcaacttctgtt
ccagcgtggcagtggctggcacacgtgtatcagtgccaaggaatgatgggtgctgcagag
atgtgttatagaaagagtctacaagtagcatcccagcagggcagttggagtgggaagctg
tcaagtctgctgagactagctctacttgctttaaaagcctgcatggctaatattcccaat
aatcactggtcatctttggttcaagaagctacaactgaggccttgaaactttgcttttgt
ccattggctgtctttttacaagctttgttacaattcaaccgcaaaatgggggcaagagag
acacggcgacttttggaaaaagtggtgtatcatcaaccggggtttcccaagtctattgta
tcagctgcacgttggtacctgctgagacacttacatgccaaaaatgactacgaacttatt
gatgtgctggtaaacaatgccaaaactcatggagatacaagagcattggaattgaatcag
aaattgtcctcacagtaa
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integrated database retrieval system
