Prionailurus viverrinus (fishing cat): 125165340
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Entry
125165340 CDS
T09889
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125165340 (TRIM38)
Enzymes [BR:
pviv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125165340 (TRIM38)
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125165340 (TRIM38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
RING_XB3-XBAT31
U-box
zf-C3HC4_2
zf-C3HC4_3
Trm112p
ATG14
zf-RING_5
FANCL_C
DUF4618
zf-RING_4
zf-Nse
zf-RING_6
Fib_alpha
DUF4407
zf-RING_10
RDM
XLF
Gp-FAR-1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
125165340
NCBI-ProteinID:
XP_047714046
LinkDB
All DBs
Position
B2:complement(3745925..3757524)
Genome browser
AA seq
465 aa
AA seq
DB search
MASPIVTKKMKEEVTCAICLLLMAEPVSISCGHSYCRQCINDFLKNLHQEEPSLNVFSCP
HCRAPFRMASVRPNKHLGNLIEAIKEMDQEMSCEEHGEFLHLFCEDEGQLICWRCERSPQ
HKGHDTAVIEDVCQGYKERLQNAQMNLKQLEEECTKQKVLARKQISEWNEKIESQKQKIQ
SDFKNLQSFLHEEEKSYLWRLEKENKQTLQRLMDNEATLKQKSQELKSHILELEKRCQSS
AQKLLQDVKETLRRSSAVKLETPEAHSLEVHTVCSVSELYFDMKKMLRSYQVNVTLDPDT
AHHELILSEDRRQVTRGCFQENLGSSSRRFTVLPSILGCEGFTSGRQYFEVDVGEGTGWD
LGVCLENVHRDIGVIQCPQSGFWAIRLCVKKGYVALTSPLTSLYLREQPLVVGVFLDCDV
GVVSFYNMTTGSHIFTFPRASFSDTLRPYFRVYQHSPLFLPPPDK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccccatagtcaccaagaagatgaaggaggaagtcacctgcgccatctgcctg
ctcctgatggcggagcccgtgagcatcagctgtgggcacagctactgcagacagtgcatc
aacgacttcctgaagaacctacaccaggaggagccgtcgctcaatgtgttttcctgtccc
cactgccgggctccatttcggatggccagcgtccggcccaacaagcacctgggaaatctc
atcgaagccatcaaggagatggaccaggaaatgtcgtgtgaggaacacggagagttcctc
cacctgttctgcgaagacgaaggccagctcatctgctggcgctgtgagcggtcaccgcag
cacaaagggcacgacacagctgtcatcgaggacgtatgccaaggctacaaggaaaggctc
cagaatgcccagatgaacttgaagcagctggaagaggagtgtacgaaacagaaggtgctc
gccagaaagcaaataagcgaatggaatgagaagatagagagtcagaaacaaaaaatccag
tctgacttcaagaatcttcagagctttttgcatgaagaggagaagtcttacctgtggaga
ctggagaaggagaacaagcagactctacagagactgatggataacgaggccactctgaaa
cagaagagccaagaactcaagagtcacatcctggaactagagaagagatgtcagagctca
gcccagaagttgctgcaggacgtgaaagagactttgcgcaggagttcggctgtgaagctg
gaaacaccagaggcccattctttggaagttcatactgtgtgcagtgtctctgagctttat
tttgatatgaagaaaatgttaaggagctatcaagtcaacgtgactctggatccagacaca
gcccatcatgagctaattctgtctgaagatcggagacaagtgactcgtggatgcttccag
gagaatctaggcagttcctctaggagattcaccgtcttacccagtatcctgggctgtgaa
ggcttcacctcaggaagacagtactttgaagtagatgtaggagaaggaactggctgggat
ttaggagtttgtttggaaaatgtgcatagggacattggcgtgatacagtgccctcagtct
ggattctgggccatcagactatgtgtaaagaaaggctatgtagcgctcacctctccccta
acctccctttatctgagggagcagcccctggttgtgggggtttttctggactgcgacgtc
ggggttgtatccttttacaacatgaccactggctcccacatctttaccttcccgagggcc
tccttctccgatactctccggccctacttccgggtttatcagcattctcctttgttcctg
cctcccccagacaagtaa
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