Prionailurus viverrinus (fishing cat): 125165406
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Entry
125165406 CDS
T09889
Symbol
TAP2
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv02010
ABC transporters
pviv04145
Phagosome
pviv04612
Antigen processing and presentation
pviv05163
Human cytomegalovirus infection
pviv05168
Herpes simplex virus 1 infection
pviv05169
Epstein-Barr virus infection
pviv05170
Human immunodeficiency virus 1 infection
pviv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125165406 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125165406 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125165406 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125165406 (TAP2)
05168 Herpes simplex virus 1 infection
125165406 (TAP2)
05163 Human cytomegalovirus infection
125165406 (TAP2)
05169 Epstein-Barr virus infection
125165406 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
125165406 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pviv02000
]
125165406 (TAP2)
Enzymes [BR:
pviv01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
125165406 (TAP2)
Transporters [BR:
pviv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
125165406 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_21
AAA_30
AAA_29
AAA_16
AAA_23
AAA_15
AAA_25
AAA_33
SRP54
Zeta_toxin
AAA_5
Motif
Other DBs
NCBI-GeneID:
125165406
NCBI-ProteinID:
XP_047714235
LinkDB
All DBs
Position
B2:complement(31839537..31850345)
Genome browser
AA seq
771 aa
AA seq
DB search
MLFCGLRAWAFLLLADLALLWLLQGTLGALFPRGLPGLWLEGTLRLGGLWWLLQVGGLLG
LVRTLLPPLCLVIPLFLSLRALVPGALSAPPVRVASAPWSWLLLEYGAAGLSWAMWALLS
SPGAQEKQGQENNTDLMWKLLKLSRPDLPFLLLAFIFLGGAVWGETWIPYYTGRVIDILG
GDFKPDAFASAIFSMCVISVVSSLCAGSRGGIFTFTESSINVRVREQLFSSLLRQDLSFF
QETKTGELNSRLSSDTKMLSQWLAFNANVLLRSLVKTVGLYCFMISLSPRLTLLSLLEMP
LVIAGEKMYNVRHQAVLQEIQNAVAKAGQVVREAVGGLQTVRSFGAEELEICLYKEALER
CRQLWWQRDLEHTLYGLFRRMLRLGMQALMLYRGLQQILAGDLTQGALLSFLLYQEVAAT
HVHALVYMCGDMLCNIGAAEKVFQYLDREPNMPPLGTLAPSTLQGLVEFQDVSFAYPNCP
DQPVLKGLTFTLRPGQMTALVGPNGSGKSTVAALLQNLYQPTKGQVLLDGRPVSQYEHCY
LHRQVASVGQEPVLFSGSVRDNIAYGLKSCGDEKVMAAACGASADRFIQEMEHGLDSDVG
EKGNQLAVGQKQCLAIARALVRDPQVLILDEATSALDVQCEQSLQDWRSRGDRTVLVIAH
RLKTVQSADQILVLRQGELLEHTQLAEGQDLYSRLLQTQXGGLRPQDTKPSHGHLRDPEQ
LVLSVSLGSCLWVVIPGVWEACWKFGPCVLLLRLAVGRGGGVICDHFPGAE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctgtggcctgagagcctgggccttcctgctgctggctgacttggctctactc
tggctgcttcaggggactctaggggctctgtttccccgagggcttccaggcctgtggctg
gaggggaccctgcgactcggagggctctggtggctgctacaggtgggaggactgctagga
ttggtgagaacactgctgccccctctctgcctggtgatcccgctgtttctctccctgaga
gccctggtcccaggggccttgagtgctcccccagtcagagtggcttcggccccttggagc
tggctgctgttggagtacggggctgcggggctaagctgggcaatgtgggccctgctgagc
tctccaggagcccaggagaagcagggccaggagaacaacacagacttgatgtggaagctg
ctgaagctctccaggccagacctgcctttcctccttttggccttcatcttccttggtggt
gccgtatggggggagacatggatcccttactatactggtcgtgtcattgacatccttgga
ggggatttcaagcctgatgcctttgccagcgccatcttttccatgtgcgtcatatccgtt
gtgagctccctgtgcgcaggttcccgaggaggcatcttcaccttcaccgagtccagtatc
aacgtgcgggtcagggagcagcttttctcctcccttctgcgccaggacctcagtttcttc
caggagactaagacaggggaactgaattcaaggttgagctccgataccaaaatgttgagc
cagtggcttgcttttaatgccaatgtgctcttgcgaagcctggtcaaaacggtggggctg
tattgcttcatgatcagcctgtcccctcgactcaccctcctctctttgctcgagatgcct
ctggtaatagctggtgaaaagatgtacaatgtccgccatcaggcagtgctccaggagatc
cagaacgcagtggcaaaagcagggcaggtggtgcgggaggcagttggagggctgcagacc
gtgcgcagttttggggccgaggagctggagatctgtctctataaggaggccctggagcga
tgccggcagctgtggtggcaacgagacctggaacataccctctatgggctctttcggagg
atgctgcgtttgggaatgcaggcactgatgctgtaccgtggactgcagcagattctggct
ggggacctcacccagggtgcactgctctcctttctgctctaccaggaggtggcggccacg
catgtgcatgccctggtatacatgtgtggagatatgctctgcaacataggggctgccgag
aaagttttccaatacctggaccgagagccaaatatgcctcctttggggacgctggcgcct
tccactctgcagggccttgtggaattccaagatgtctcttttgcatatcccaattgccct
gaccagcctgtgctcaaggggctgacgttcaccctacgtcctggtcagatgactgcactg
gtgggacccaatgggtctgggaagagcaccgtggctgccctgctgcagaatctgtatcag
cccactaaagggcaggtgctgctggacgggaggcctgtctcccagtatgaacactgctac
ctgcaccggcaggtggcttcggttgggcaggagcctgtgctgttctcgggttctgtgagg
gacaacattgcttatgggctgaagagctgcggtgatgagaaggtgatggctgctgcctgc
ggtgccagtgcagacaggttcatacaggagatggagcatggactggattcagatgtaggg
gagaaagggaatcagttggctgtgggacagaaacaatgtctggccatcgcccgggccctt
gtgcgggacccacaagtcctcatcctggatgaagccaccagtgccctggacgtccagtgt
gagcagtctctgcaggactggagatcccgtggggaccgaacggtgctggtgatcgcgcac
aggctgaagacggtgcagagtgcggaccagatcctggtgctcaggcagggagagctgctg
gagcacactcagctagccgaggggcaggacctctattcccgtctgctgcagacacaanct
ggaggactgaggccccaggacaccaagccctctcatggccatctccgtgacccagagcag
ctcgtgctttcagtttccctgggctcgtgtctctgggtagtcattcctggagtctgggaa
gcatgctggaagtttggaccatgtgtgctcttattgcggctggcagtggggcggggggga
ggtgttatctgtgaccatttccctggtgctgagtag
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