Prionailurus viverrinus (fishing cat): 125165468
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Entry
125165468 CDS
T09889
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125165468 (SHPRH)
Enzymes [BR:
pviv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125165468 (SHPRH)
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125165468 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_12
TPR_10
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
125165468
NCBI-ProteinID:
XP_047714368
LinkDB
All DBs
Position
B2:complement(131998566..132092911)
Genome browser
AA seq
1685 aa
AA seq
DB search
MSSRRKRAPPVRVDEAKQQQLRWNMHEDRRNEPLILTDEEHPCSGSDFSSADCIILGDSL
QEEVAHRDKKRCLEAVSIAKSVDKEETGGILSPLSVKLNIVISPYHFDNSWRAFLGEFTL
QLLPEQSLTEDFSERSFTLMSSESSGQFLIYVNSESEDAEKQEKGLNEPVSICDKGIRVE
SSFSGEMLEDLGWLQKKKRIKLYQKPEGNHIIKVGIYLLEGGLAKLDFLSDANSRMKKFN
QLMKRVMEKLYNFIIPDVLEEDEEDSESEPEGQDIDELYQFVKQTHQQETQSIQVDVQHP
ALIPVLRPYQREAVNWMLQQEHFRSAPASENTLHFLWREIVTSEGLKLYYNPYTGCIIRD
YPNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHQSG
GKVKNTETPNTEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQR
NRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDTYDKTKKQAIGSPRKIQKES
RKSGNKDTDSEYLPSNTSDDDDDPYYYYYKPRKNRSKFKKKPVLSTKKGKGQPNINLSSQ
DHCPATSDSGITDVTTSKSTCIFEIKEERGAKDQAESLNPTDGDVPQSNIRSPCNSSDYR
FECICGELDQVDRKPRVQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSTRAT
LIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSE
LNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRL
SGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCRKNPQLLYSFIAK
ILWRSAKKDVIDQIQIPPQTEEVHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALK
LSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEE
AHRQLVCALNGLAGIHIIKGEYAVAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMEL
LVAKHPGIPPTLRDSRLEEEAKQLREHYMSKCNTEVAEAQQAVQPVQQTVRELQRKIYSN
SPWWLNVIHRAIEFSIDEELVQRVRNEITSHYKQQTGKLSMSEKFHDCRGLQFLLTTQME
ELNKFQKLVREAVKNLEGPPSRNVIESATICHLRPTRLPLNCCVFCKADELFTEYESKLF
SHTVKGQTAIFEEMIEDEEGLVDDRIPTTSRGLWAVSETERSMKALLSFAKSHRFDVEFI
DEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAIDELAMATERLRVRHPREPKPNPPVLH
IIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQ
LGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKASQ
EEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQI
SRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRV
HRIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTNSSVKHPEASVLTLADLADLFTKE
TEELE
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgacggaaacgtgctcccccagtgagagttgatgaagcaaagcaacagcag
cttcgctggaatatgcatgaagacagaaggaatgagcctctcattctaactgatgaggag
cacccctgctcgggttcagatttctcttctgctgactgcatcatcctcggtgatagccta
caagaagaagtggctcacagagataagaagaggtgtttggaagcagtgagcatcgcaaaa
tcggttgataaagaagagaccggtggcattctttctcctctgtctgtaaagctgaatatt
gtgatttctccctatcactttgataattcttggagggcatttctaggagaattcactctt
cagctccttcccgaacagagtttaactgaagatttttcagaaaggagttttacactgatg
agttcagagtcaagcggtcagttcctgatctatgttaattcagaaagcgaagatgcagag
aaacaagaaaaaggactcaacgagccagtcagtatttgtgataagggtattcgagtggaa
tcatctttcagtggtgaaatgcttgaagatttggggtggctacaaaagaagaaaagaata
aaactttaccaaaaaccagaagggaatcacattattaaggttggaatttatcttttggaa
ggtggcctagcaaaactagactttttgagtgatgcaaattcaagaatgaagaagtttaat
cagcttatgaaaagagtgatggaaaagttgtacaattttattattccagatgtgttggaa
gaggatgaagaagattcagagagtgagccagagggacaggacatcgatgagctctatcag
tttgtgaagcagacacatcagcaagaaacacagtccatccaagtggatgtccagcatcct
gcattgattcctgtgctgagaccataccaaagagaggctgtcaattggatgctacaacaa
gagcatttcagaagcgctcctgctagtgagaataccctgcatttcttatggcgagagatt
gtcacatctgagggtttgaaactctactacaatccgtacacaggctgcatcatccgtgat
tacccaaatgctgggccacagttgcttggcggaatcttagcagatgagatgggtcttgga
aagacagtggaggttttggctctgattctgacacatacccgacaagatgtcaaacaagat
gctctcactcttcctgagggaaaagtggtgaattatttcattccatcacatcagtctgga
ggaaaagtaaaaaacacagaaaccccaaatacggaatttgaaccaaaagaaaaagttcag
tgtccccctacacgtgtgatgatcctgacagctgtgaaagaaatgaatggaaaaaaagga
gtttccatcctttccatctataagtatgtcagttctatatatagatacgatgttcagcgg
aacaggagtcttctgaaacggatgctgaaatgtttaatttttgaaggtcttgtgaaacag
atcaaagggcatggtttttctgggacttttacattggggaagaattacaaggaagaagat
acatatgataaaacaaaaaagcaggcaatagggagtccaaggaaaattcagaaagaatcc
agaaaatcagggaacaaagacacagattctgaatacttgccatcaaacacatctgatgat
gatgatgatccttattattattactataagcctcggaaaaatcgtagtaaattcaagaaa
aagcctgttctatccacaaaaaagggaaaaggtcagcctaatatcaatctcagttcacaa
gatcactgtccagctaccagtgactctggaattactgatgttaccacatctaaaagtaca
tgtatctttgaaatcaaggaagaacgtggagcaaaggaccaagctgaatctttaaaccct
accgacggtgatgtgccacaatctaatatcaggagtccctgtaattcctcagattatcgc
tttgagtgcatatgtggtgagcttgatcaggtagaccgtaaacctcgtgttcagtgcctg
aaatgccacctatggcaacatgcaaaatgtgtgaattatgaagagaagaatctgaagatt
aagcctttttactgcccccattgccttgttgcaatggagccagtatcaacacgagcaact
ctgatcatctcgcccagttccatttgtcatcagtgggtggatgaaatcaacaggcatgtg
aggtcatcatctcttcgagtcttggtatatcaaggagtgaagaaagatggttttttacag
cctcactttttggctgaacaggatatagttatcattacctatgatgtccttcgttcagaa
cttaactatgtagatatcccacatagcaacagtgaggatgggcgtcgtttgcggaaccag
aagcgctatatggccattcccagccccctagtagctgtggagtggtggaggatctgcctt
gatgaagcccagatggttgaatgtcctgctgtaaaagctgcagaaatggctcagcgcttg
agtgggattaatcgctggtgtatcagtggcactccagtacagagaggattggaggatctt
tttgggttggtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcga
cttctctatcgcccttactgcaggaagaatcctcagctcctctacagctttattgccaag
atactatggaggtctgcaaagaaagatgtgattgaccaaatccagattccccctcagaca
gaagaagtccactggcttcacttttctccagtggaaagacatttctatcaccgccagcat
gaagtgtgctgccaggatgcagtagtaaagctcaggaagatttctgactgggccctgaag
ctcagcagcctggaccgaaggacggtcacctccattctgtatccactgctgaggctcagg
caggcctgctgccacccacaggccgttcgtggggagtttttgccactccagaaaagcacc
atgacaatggaagagctgctaacatctctacagaagaaatgtggaacagagtgtgaagaa
gcacatcggcaactagtttgcgctctcaatggcttagcaggcatccacatcattaaaggt
gagtatgctgtggcagcagaactgtacagagaagtgttgcgttcatctgaggaacacaaa
ggaaaactcaaaaccgattcactccaaagacttcatgccacccataacttgatggaattg
ttggtagccaagcacccaggaatacctcctaccttacgagatagcagacttgaagaagag
gccaaacagctgcgagagcattacatgagcaagtgtaacacggaagttgcagaagcacag
caagctgtgcagccggtgcagcagacggtgcgggagctgcagagaaagatttattcaaat
tctccttggtggctgaatgtgatccacagagcaatagaattctctattgacgaggaactt
gttcagcgagtgcgaaatgaaataaccagccactacaagcaacaaactgggaagctttct
atgtcagagaagttccatgactgcagaggtcttcagttcttacttacaacacaaatggaa
gagctgaataaattccagaagctagtaagagaggctgtaaaaaacctggagggacctcca
tctcgtaatgttattgaatcagcaacaatctgccacctccgaccaaccagacttcctctc
aactgttgtgtcttttgtaaggcggatgaattgttcacagagtacgaatcaaagctgttt
tcccacacagtgaaaggccagactgcaatatttgaggagatgatagaagatgaagaagga
ctggtggatgatcgaatacccaccaccagccggggtttgtgggcagtaagtgagacagag
cgatctatgaaagcattgctatcatttgcaaaatcacatagatttgatgttgaattcatt
gatgaaggaagtacttcaatggatctttttgaagcatggaaaaaggaatataagttgctt
catgaatattggatggctctaaggaatcgtgtatctgctattgatgaacttgcaatggct
acagaacgactgagagtgcgtcatcctagggagccaaagcccaacccacctgttcttcat
atcattgaaccacatgaggtagaacaaaatcgtataaaactactaaatgataaagctgtt
gctacatcacaacttcagaagaaacttgggcagcttctttacctaactaacttggagaag
tctcaagataaaacatcaggaggcattaatccagaaccttgtccaatctgtgctcggcag
ctgggaaaacagtgggcagtactgacctgtggacactgcttctgtaatgaatgcatttca
attattattgaacagtacagcgtagggtctcacagaagctccattaagtgtgccatctgc
cgccagaccacatctcacaaagaaatctcgtacgtcttcacctcagagaaagccagccag
gaagaggacatccctgtgaagggcagccattctaccaaagtggaagctgtggtcagaact
ctgatgagaatccagctcagagacccgggcgctaaagcactggtcttctcaacgtggcaa
gacgtattagatattatttcaaaagccctcactgacaacaacatggaatttgctcagatc
agccgtgttaagacatttcaggagaacctctcagcatttaaacatgatccccaaatcaat
attttgctgctgcccctgcacacaggttctaacggattaactatcattgaagcaactcat
gttctcttggtggagcccattttgaaccctgcccacgagcttcaggccattgggagggtg
caccgaattggacagaccaaacctactattgtacacagattcttaattaaggcaacaata
gaagaaagaatgcaagccatgctgaaaactgctgagaagagtcacacgaactcatcggtg
aagcatccagaggcctctgtcttaaccttggctgatctggcagacctgtttaccaaagaa
actgaagaacttgaatga
DBGET
integrated database retrieval system
