Prionailurus viverrinus (fishing cat): 125165500
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Entry
125165500 CDS
T09889
Symbol
TRIM27
Name
(RefSeq) zinc finger protein RFP isoform X1
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pviv04121
]
125165500 (TRIM27)
Enzymes [BR:
pviv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125165500 (TRIM27)
Ubiquitin system [BR:
pviv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125165500 (TRIM27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
AAA_13
zf-Tbcl_FmdE
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
125165500
NCBI-ProteinID:
XP_047714481
LinkDB
All DBs
Position
B2:1346494..1363347
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AA seq
521 aa
AA seq
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MASGSVAECLQQETSCPVCLQYFAEPMMLDCGHNICCACLTRCWGAAETDVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGACEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLCPCLSPAQ
SLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGL
IAQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLK
QFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPE
RFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLW
YGKEYWALTSPMTALPLRTPLQRVGVFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRP
YFSLSYSGGKSAAPLIICPMSGIDGFSGHVGDHIHSMETSP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctgcagcaggagaccagctgccccgtgtgcctg
cagtacttcgccgagcccatgatgctcgattgcggccacaacatctgctgcgcgtgcctc
acccgctgctggggcgcggcggagaccgacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcag
ctgcgcaccgagcggccgtcggggcccggcggcgagatgggcgcgtgcgagaagcaccgc
gagccgctcaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcccgcgagcaccgcggccacagcgtgctgccgctcgaggaggcggtggagggcttcaag
gagcaaatccagaaccagctggaccatctgaaaagagtgaaagacttaaagaagaggcgt
cgggcacagggggagcaggcccgagctgaactcttgtgcccctgcctgtcccctgcgcag
agcctgacccagatggagagggagaagatcgtctgggagtttgagcagctctatcactcc
ttgaaggaacatgagtaccgcctcctggcccgtctggaggagctggacctggccatctac
aacagcatcaatggcgccatcacccagttctcctgcaacatctcccacttgagtggcctg
attgcccagctggaggagaagcagcagcagcccaccagggagctactgcaggacatcggg
gacacgttgagcagagctgaaagaatccggatccctgaaccgtggatcacacctccagat
ctgcaagagaaaatccacatttttgcacaaaaatgtctgttcttgacagagagtctgaag
cagttcacagaaaaaatgcagtcggatatggagaaaatccaagaattgagagaggctcag
ttatactcagtggacgtgactctggacccggacacggcctaccccagcctcatcctctcc
gataacctccggcaagtgcggtacagctacctgcaacaggacctacctgacaaccccgag
cgcttcaatctgttcccctgtgtcttgggctctccgtgcttcatcgctgggaggcactac
tgggaggtggaggtgggagacaaagccaagtggaccatcggcgtctgtgaagactcggtg
tgcagaaaaggcggcgtgacctcggccccccagaatggattctgggccgtgtccttgtgg
tacgggaaagagtactgggctctcacctccccaatgactgccctccccctacggacccct
ctccagcgggtgggggttttcttggactatgacgctggcgaggtgtctttctacaacgtg
actgagcggtgtcacactttcactttctctcatgccaccttctgcgggcccgtgcggccc
tacttcagcctgagctactcgggggggaagagtgcggccccactcatcatctgccccatg
agcggcatcgatgggttttccggccatgttggcgaccatattcattccatggagacttcc
ccttga
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