Prionailurus viverrinus (fishing cat): 125165659
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Entry
125165659 CDS
T09889
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Pathway
pviv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125165659 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pviv01007
]
125165659 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pviv03016
]
125165659 (VARS1)
Enzymes [BR:
pviv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
125165659 (VARS1)
Amino acid related enzymes [BR:
pviv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125165659 (VARS1)
Transfer RNA biogenesis [BR:
pviv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125165659 (VARS1)
Prokaryotic type
125165659 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
GST_C_2
tRNA-synt_1e
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
125165659
NCBI-ProteinID:
XP_047714742
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All DBs
Position
B2:complement(30444797..30460451)
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AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPPPTSRTPFPPPRLPAL
EQGHGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGASLPALG
LRSSAQDPQAALGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLYSGARLLSQQPGSEVPAPPKTATQLKKEAKK
REKLEKFQQKQKSQQQQPPPGEQKKPKPEKRGKRDPGVITYDLPTPSGEKKDVSGTMPDS
YSPQYVEAAWYPWWEQQGFFKPEYGRASVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGLSRHQLGREAFLREVWKW
KEEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIE
TMLGDVAVAVHPKDPRYQHLKGRSVIHPFSSQSLPIVFDDFVDMEFGTGAVKITPAHDQN
DYEVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLAALKERGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDW
CISRQLWWGHRIPAYFITVSDPAVPPGEDPDGRYWVSGRSEAEAREKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPFSILGWPNHSEDLNVFYPGTLLETGHDILFFWVARMVMLGLK
LTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEV
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSEPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVVAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRT
LQAPPSLCITPYPEPSECSWRDPEAEAAMELALSITRAVRSLRADYNLTRIRPDCFLEVT
DEATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDRCSVHLQLQGLVDPAR
ELGKLQAKRGEAQRQAQRLRERRAASSYPTKVPLDVQEADKVKLQQTEAELRKVEEAIAL
FQKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctgtatgtctcccctcatcccgatgccttccccagcctccgtgcccttatc
gctgcgcgttatggggaggctggggagggaccgggctggggaggagcccacccccgcgtc
tgtcttcagccacccccgaccagcaggactccctttcccccaccccgcctacccgccctg
gagcaagggcacggcgggctctgggtgtggggggccaccgctgtggcccagctgctgtgg
ccagcaggcctggggggccctggcggtagccgggccgccgtcctggtccaacagtgggtc
agttacgccgacacggagctaataccagctgcctgtggagcatcgctgccggccttggga
ctccgaagctctgcccaggacccccaggctgccctgggggccctggggagggctctgagc
cccttggaagagtggcttcggctgcatacctacctggctggggaggctcccactctggct
gacctggcggctgtcacagccttgctgctgcctttccgttacgtcctggacccctctgca
cgccggatctggggtaatgtgacacgctggtttatcacctgtgtccagcagccagaattc
cgtgcagtgctgggggaggtggttctgtactcaggggccagactgctctcccaacagcca
ggctctgaggtccctgcacccccaaagactgctacgcaactcaagaaagaggcaaagaaa
cgggagaagctagagaaattccagcagaagcagaagagccaacagcagcagccaccccca
ggggagcagaagaaaccaaaaccagagaagagagggaaacgggatcctggggtcattacc
tacgacctcccaaccccatctggggaaaagaaagatgtcagtggcaccatgcctgactcc
tacagccctcagtacgtggaagctgcctggtacccttggtgggagcagcagggcttcttc
aagcccgagtatggacgtgccagcgtgtcagcaccaaatccccggggaatcttcatgatg
tgcatcccaccccccaatgtgacaggctccctgcacctgggccacgcactcaccaacgcc
atccaggactccctgacccgatggcaccgcatgcgaggggagaccaccctgtggaaccct
ggctgtgaccacgctggcattgccactcaggtggtcgtggagaagaaactctggcgcgaa
cgggggctgagccggcaccagctgggccgagaggccttcctgcgggaggtctggaagtgg
aaagaggagaagggtgaccggatttaccaccagctgaagaagcttggcagctctttggac
tggaatcgagcctgtttcaccatggaccctaaactctcagcagctgtgacagaggccttc
gtccggctccacgaggaaggagtcatttaccgcagcacccgtctcgtcaactggtcctgc
accctcaactctgcgatctccgacatcgaggtggataagaaggagctgacaggtcgcact
ctgctctccgtgcctggctacaaggagaaggtggagtttggggtccttgtctcctttgcc
tacaaggtccaaggctcagacagtgatgaggaggtggtagtggcgacaactcggattgaa
acgatgctgggagacgtggccgtagctgtgcaccccaaagacccgagataccagcacctg
aaggggaggagcgtgattcacccattctcgtctcagagcctccccatcgtctttgacgat
tttgtggacatggagtttggcacaggtgcagtgaagatcacccccgcacatgaccagaac
gactatgaagtcgggcagcggcacgggctggaggccatcagcatcatggactcccgaggg
gccctcatcaacgtgcccccgcctttcctgggcctaccgaggtttgaggccaggaaggca
gtgctggcggcactgaaggagcggggactgttccggggcattgaggacaaccccatggtg
gtgccgctttgcaaccggtccaaggacgtggtggagcctctcctgcggccacagtggtac
gtgcgctgtggggagatggcccaggccgctagtgctgctgtgacacggggagacctccgc
atcctacctgaggcccatcaacggacatggcacgcctggatggacaacatccgggactgg
tgtatctcccggcagctgtggtggggccatcgcatcccagcctacttcatcacagttagt
gacccagctgtgcccccaggggaggaccctgatgggcggtactgggtgagcgggcgcagc
gaggccgaggcccgggagaaggcagccaaggaatttggagtgtcccctgacaagatcagt
ctccagcaagatgaggatgtgttggacacctggttctcctctggcctcttccccttctcc
atcctgggctggcccaaccactcagaagatctgaatgtgttctacccggggacgctgctg
gagacgggccatgacatcctgttcttctgggtggccaggatggtcatgcttggcctgaag
ctcactggcaagctgcctttcagagaggtctacctccacgccattgtgcgagatgcccat
ggccgaaagatgagcaagtctctaggcaacgtcatcgaccccctggacgtcatccacgga
gtctccctgcagggcctccacgaccagttactgaacagcaacctggatcccagtgaggtg
gagaaggctaaagaagggcagaaggcagacttcccggcggggattcccgagtgcggcacc
gatgccctccggtttggactgtgtgcctacacgtcccagggtcgcgacatcaacctggat
gtgaaccggatattgggataccgccacttctgcaacaagctctggaacgccacaaagttt
gccctgcgtggccttgggaagggttttgtgccatcacccacctctgagcctggaggccat
gagagcctggtggaccgctggatccgcagccggctgactgaggccgtgaggctcagcaac
caaggtttccaggcctatgatttcccagctgtcaccactgcccagtacagcttctggctc
tatgagctctgtgatgtctacctggagtgcctgaagcccgtgctgaatggggtggaccag
gtggtggccgagtgtgctcgccagaccctctatacctgcctggacgttggcctgcggctg
ctgtcacccttcatgccctttgtgactgaggagctgttccagaggctgccccggcggaca
ctacaagctccgcctagcctctgtattaccccctatccggagccctcggagtgctcctgg
agggaccctgaggcagaagctgccatggaactggccctaagcatcacacgagctgtgcgc
tccctgcgtgccgactacaacctcacccggatccggcctgattgtttcctagaagtgact
gatgaggccacgggcgctctggcgtcggctgtgtcaggctacgtgcaggcgctggccagc
gcgggcgtggtggctgtcctggccctgggggctcccgcgccacagggctgtgctgtggcc
ctggcctctgaccgctgctccgtccacctgcagctgcagggactggtggacccggcccgg
gagctgggcaagctgcaggccaagcgtggtgaggcacagcggcaggcacagcgtctgcgg
gagcgccgcgctgcctcaagctaccctacgaaggtgccccttgatgtccaggaggcagac
aaagtcaagctccagcagacagaagcagagctcaggaaggtggaggaggccatcgcgcta
tttcagaagatgctgtga
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integrated database retrieval system
