Prionailurus viverrinus (fishing cat): 125165772
Help
Entry
125165772 CDS
T09889
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125165772 (CHD1)
03036 Chromosome and associated proteins [BR:
pviv03036
]
125165772 (CHD1)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125165772 (CHD1)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125165772 (CHD1)
SLIK complex
125165772 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
125165772
NCBI-ProteinID:
XP_047715019
LinkDB
All DBs
Position
A1:complement(160962565..161041490)
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQTGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQHQASSNSG
SEEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESD
YEPKNKVKSRKPQNRSKAKNGKKILGQKKRQLDSSEEEDDEDYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRETIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEA
QRLSGAGGSKRRKARAKKNKALKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNK
KIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDLKEKDFKEKRE
NKVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEELDQK
TFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNAQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYK
QESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEYTHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagcgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccaaacaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcagcatcaagcttcatctaatagtgga
tcagaagaggattcttcgagcagtgaagattctgatgactcatcaaatgaagtcaaaagg
aaaaaacataaagatgaagattggcaaatgtctgggtcaggatctccatctcaatctggc
tcagattcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgat
tatgagccaaaaaacaaagttaaaagcaggaaacctcaaaatagatctaaggcaaaaaat
ggaaagaaaattcttggacaaaaaaagagacagcttgattcatctgaggaggaggatgat
gaagattatgataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctat
aaagaagatgaagaaatgaaaacagattctgatgacctactggaagtctgcggagaggat
gttcctcaacctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggatt
gggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtcccatatccacaatacttgggagacagaagaaacccttaagcagcagaat
gttagaggaatgaaaaaattggataattataagaaaaaagatcaggagacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagat
gatctacacaaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtca
gcagctggttatcccgattattattgcaaatggcagggccttccatactcagagtgcagc
tgggaggatggagccctaatttccaaaaagtttcaagcatgcatagatgagtattttagc
aggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaaga
tttgtagccctgaagaagcagccatcctacattggaggacatgagagtttagaattaaga
gattatcaactgaatggtttaaattggcttgctcattcttggtgcaaaggaaatagttgc
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgagcatcaattatatggaccttttctgttagtagtaccactctccactctt
acttcctggcaaagggaaattcagacatgggcttctcagatgaatgctgtggtctattta
ggtgacattaacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatacttttaacaacttatgaaattttattgaaggataaggcattc
cttggaggtctgaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagactttaaatccaatcaccgtctccttattact
ggaactcctctacagaactcccttaaagagctgtggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgaaccatttctgttacgcagagttaaaaaagatgtg
gaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacag
aaacagtattacaaatggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaa
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagacatacttgcagaa
tatttgaaataccgtcaattcccctttcaaagattagatggatcaataaaaggggagctg
agaaaacaagcactagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggtctaggaattaatttagcctctgctgatactgttgttatattt
gattccgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
cagaagaaacaggtgaatatttatcgtctagttactaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagagaatggacaca
actgggaagacagtactacatacaggttctgccccgtcaagttctactcctttcaataaa
gaagaattatcagctatcttaaagtttggtgctgaggaactttttaaggaacctgaagga
gaagaacaagaaccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgcc
aacttttcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaat
tgggaggaaataattcctgaagatcaacgaagacgattagaagaggaagaaagacaaaag
gaacttgaagaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagtttt
aatggaagtgaagggaggcgcagtagaagtaggagatattctggatctgatagtgactcg
atctcagaaaggaaaaggccaaagaaacgtggaagaccacggactatcccccgggagact
atcaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaagtttggt
ggccctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagag
accgacctcagacgactaggagaattggtacataacggttgcattaaagctctaaaggat
aattcttcaggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattc
cgaatatcaggagtacaggtgaatgccaagctcgtcatctcccatgaagaagaattgata
ccattgcataaatccattccttcagatccagaagaaagaaaacagtatactatcccatgc
catacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttg
cagacacgtgcagactacctcatcaaattactcagtaaagatcttgcaagaaaagaagct
cagagactttctggtgcaggaggttcaaagaggagaaaagcaagagctaagaagaataaa
gcattgaagtctataaaagtgaaagaagaaataaagagtgattcttcacccttgccctca
gagaagtctgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaa
aaaattaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaag
gaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggag
ataaaagaaaaagaggataagaaagatttaaaggaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaa
tccaagtctgatagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcat
atcacagcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaag
acattcagcatttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgat
aggcctgaaaaaggcctttcagaaagagaacaactggagcatactagacagtgtttaata
aaaattggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttacggagttcgatgcaagaaaa
ttacataagttatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgac
cagaacagcagcctgaatgctcaagtaattagaaatccagatgtggaaagattaaaagag
aatacaaatcacgatgatagcagcagggacagttattcatctgatagacacttatctcag
tatcatgatcatcataaagaccgacatcagggagattcttacaaaaagagtgactctagg
aaaagaccctattcttcctttagtaatggcaaagatcatcgtgactgggatcattacaag
caagaaagcaggtattatagtgatagagagaaacacagaaaactggatgatcacaggagt
agagatcacaggtcaaatttggaaggaagtttaaaggacagatctcattctgatcatcgt
tctcattcagaccatcggttgcattcagaccatcgggcaagttctgaatatacacaccat
aaatcttccagggattataggtatcactcagattggcagatggaccacagagcttccagt
agtggccccagatcaccactagatcagaggtctccttatggctccagatctccatttgaa
cactcagttgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
