Prionailurus viverrinus (fishing cat): 125166013
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Entry
125166013 CDS
T09889
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pviv03021
]
125166013 (SCAF8)
03041 Spliceosome [BR:
pviv03041
]
125166013 (SCAF8)
Transcription machinery [BR:
pviv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125166013 (SCAF8)
Spliceosome [BR:
pviv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125166013 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125166013
NCBI-ProteinID:
XP_047715565
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All DBs
Position
B2:139846175..140044245
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AA seq
1270 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEISASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPL
SMTPETVKDVGFGSLVLPGGSVASNLATSALPAGNVFNPPTKQAEPEEKVPHLIDHQIPS
AENTRSVIPNDISSSSAILGGQPPNVTSNSGILGVQRPNVSSNSEIIGVRPSNVSSSAGI
IGPQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNNSGLIGVQPPNVPNTAGLLGTQ
PPAGPQNLPPLNLPGQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGIPPPSVLDS
ALHPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP
MEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
RRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGSYRFDPRSGPWNRGF
GQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDFFEG
ATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVADIESEP
VVESTETEGT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgagttgtattccctgaatgactataaaccaccc
atttctaaagccaaaatgacccaaattactaaggctgccatcaaagctattaagttctat
aaacacgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactttatgttattgactctattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagtactttccagaatttatat
cgttgccctggggatgataagagtaaaatagtgagagtattaaacttatggcagaaaaat
aatgtgtttaagagtgagattattcagcctcttctggatatggcagcagggattcctccc
ccggttgtcacacctgttttggccagtactactgctgctatgagcaacaccccaggaacg
cctgtgacacctgttactccagccaatgttgtccagggtctgcccgatccatgggtatct
cagataacaaatacagatacacttgccgctgtagctcagatcttacaaagtcctcaaggc
caacagcttcagcagttgatacaaactttacaactccagcagcagaagcctcagccttct
atcctgcaggccctggatgcggggctggttgtgcagttgcaagctctcacggcccagctg
acggcggcagctgcagcggccaacaccctgaaccccttagaacagggggtgtctttcaac
aagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaacccaaa
aaggaaatttcagcttctcaactttctcatgtttcagaatctgtgaacaattcaattttt
catcagatagcagaacaactacagcagcaaaaccttgaacatctcagacagcagctcctg
gaacagcaacagcctcaaaaggcaacccctcaggatagtcaggaaggaacatttggatca
gaacattcagcatcaccatcacaagggagcagtcaacagcatttcctcgaacctgaagca
aatttggatgattctatagatattcagcaacaggacatggatatagatgaagggcaagat
ggagtggaagaggagatcttcgaacaagaagcaaaaaaagtggctgttcgctcaagatca
agaacacattcacgatctcgttcaagatcgccaaggaaacgaaggtctcggtcgcgatct
ggttctcgaaagcgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaagagg
aaatcatcacgttcatactcaagtgaaaggagagcaagagaaagggagaaagaacgacag
aagaagggattacctccaattagatctaaaacattaagtgtatgtagtactactttatgg
gttggtcaggtggataagaaggcaacccagcaagatttaaccaatctgtttgaagagttt
ggacagattgaatccattaatatgattcctcccaggggctgtgcgtatgtctgcatggtt
caccgacaagatgctttccgggctcttcagaaacttagttctggatcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaacaa
ttttgggatgtggatcttggagttacatacataccatgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgagtgggaa
actgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaactcca
gttgaaaaggagacagtggtcacaacccaggcagaggtttttcctccacctgtcgctatg
ttacagattccagtggcgccagctgtgcctacagttagtttagttccaccagcatttccg
gtctccatgccggttcctcctcctggattcagtccaatccctccacctccttttctgcga
gcgagttttaacccttcacaaccacctcctggtttcatgccacctccagttccaccacct
gttgtaccgccacctgctattccaccagtagtgccaacatctttagtgcagccgccatta
tccatgactccagaaaccgtgaaagatgttggatttggtagtcttgttttaccgggtggt
tctgttgccagcaatcttgctacttctgctctgccagctggaaatgtttttaatcctcca
actaaacaagcagagcctgaagaaaaagtacctcatcttatagaccaccagattccttct
gctgaaaacaccagatcagtgattccaaatgatatttcaagtagctctgcaattttagga
ggacagccaccaaatgtgacaagcaattctggaattttgggagtccaaagaccaaatgtg
tcgagtaattctgaaattattggagtccggccatctaatgtttccagtagtgctgggatt
attggaccccagccaccaaatattctaaataactctggaattttgggactacagccacca
actgtgtcaagtagttctggacttttgggagtgctacccccaaatattcctaataattcg
ggactaataggagtacagccaccaaatgttccaaatactgctggacttttgggaacacag
ccaccagccgggcctcaaaacttaccccctttaaatctccctggtcaaaggatgcctgca
atgccaatgttagacattcgtccgggactaataccacagacacctggaccaagattccct
ttaatacagcctggaatcccaccccagcggggaatccctcccccgtcggtacttgattca
gctcttcatccaccaccccgtggtccgtttcctccaggagatatttttagtcagccagaa
agaccttttctggttcctggaagacaaagtgtagacaatgttactaatccagagaaaagg
ataccactcgggaatgataacattcaacaggaaggagatagagattaccggtttcctccc
atggaagccagggaaagcattagtagacctcccccggtggatgttagggatgtggttgga
cggcctatagatccaagagaaggtcctggaaggcctccgttagatggtagggatcatttt
ggaagacctcctgtcgatattagagagaatcttgtgaggccaggcatagatcatcttggt
cgaagagaccactttggctttaatccagagaagccctgggggcacagagattttgatgag
agagaacatcgggttctgcctgtctatggtggtccaaaaggcttacatgaagaaagaggt
cgatttcggtctggaagttatcgatttgatcctagaagtggtccttggaacagaggattt
ggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggat
agggatgacagagattttgatttctgcagagaaattaatggaaaccgtcttggacgagat
agaattcaaaacacctgggtcccccctcctcatgctcgggtttttgatttttttgaaggg
gccacttctcaacgaaaaggtgataacgtgcctcaggttaacggtgaaaatactgagaga
catgcccaaccaccgcctttaccagtacagaatgatcctgaactttatgaaaaactgaca
tcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaacca
gtggtagaaagcacagaaactgaggggacataa
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